RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 BCL11AQ9H165 835 aa29.13■■■□□ 2.25
MRPL28-205ENST00000447696 ZFYVE28Q9HCC9 887 aa29.13■■■□□ 2.25
MRPL28-205ENST00000447696 DOCK1Q14185 1865 aa29.12■■■□□ 2.25
MRPL28-205ENST00000447696 BTBD19C9JJ37 291 aa29.12■■■□□ 2.25
MRPL28-205ENST00000447696 HABP4Q5JVS0 413 aaKnown RBP29.12■■■□□ 2.25
MRPL28-205ENST00000447696 MIGA1Q8NAN2 632 aa29.12■■■□□ 2.25
MRPL28-205ENST00000447696 ERO1AQ96HE7 468 aa29.12■■■□□ 2.25
MRPL28-205ENST00000447696 PCDHB15Q9Y5E8 787 aa29.12■■■□□ 2.25
MRPL28-205ENST00000447696 CDK5RAP2Q96SN8 1893 aa29.12■■■□□ 2.25
MRPL28-205ENST00000447696 SLURP2P0DP57 97 aa29.11■■■□□ 2.25
MRPL28-205ENST00000447696 PDE6AP16499 860 aa29.11■■■□□ 2.25
MRPL28-205ENST00000447696 OTOP1Q7RTM1 612 aa29.11■■■□□ 2.25
MRPL28-205ENST00000447696 HAUS7Q99871 368 aa29.11■■■□□ 2.25
MRPL28-205ENST00000447696 PAG1Q9NWQ8 432 aa29.11■■■□□ 2.25
MRPL28-205ENST00000447696 SMARCA5O60264 1052 aaPredicted RBP29.1■■■□□ 2.25
MRPL28-205ENST00000447696 SLC9C2Q5TAH2 1124 aa29.1■■■□□ 2.25
MRPL28-205ENST00000447696 ANKRD23Q86SG2 305 aa29.1■■■□□ 2.25
MRPL28-205ENST00000447696 BOLA2Q9H3K6 86 aa29.1■■■□□ 2.25
MRPL28-205ENST00000447696 ZHX2Q9Y6X8 837 aa29.1■■■□□ 2.25
MRPL28-205ENST00000447696 FAM196BA6NMK8 535 aa29.09■■■□□ 2.25
MRPL28-205ENST00000447696 METTL16Q86W50 562 aaKnown RBP29.09■■■□□ 2.25
MRPL28-205ENST00000447696 RIOK1Q9BRS2 568 aaKnown RBP29.09■■■□□ 2.25
MRPL28-205ENST00000447696 MOGSQ13724 837 aa29.08■■■□□ 2.25
MRPL28-205ENST00000447696 FOXP4Q8IVH2 680 aaPredicted RBP29.08■■■□□ 2.25
MRPL28-205ENST00000447696 CRBNQ96SW2 442 aa29.08■■■□□ 2.25
MRPL28-205ENST00000447696 AFG3L2Q9Y4W6 797 aa29.08■■■□□ 2.25
MRPL28-205ENST00000447696 SIPA1L1O43166 1804 aa29.07■■■□□ 2.24
MRPL28-205ENST00000447696 HLA-DOAP06340 250 aa29.07■■■□□ 2.24
MRPL28-205ENST00000447696 SP3Q02447 781 aa29.07■■■□□ 2.24
MRPL28-205ENST00000447696 TBC1D2Q9BYX2 928 aa29.07■■■□□ 2.24
MRPL28-205ENST00000447696 ECHDC1Q9NTX5 307 aa29.07■■■□□ 2.24
MRPL28-205ENST00000447696 ZNF532Q9HCE3 1301 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 A0A0G2JLL6 359 aaPredicted RBP29.06■■■□□ 2.24
MRPL28-205ENST00000447696 MAGEB6P1A0A0J9YX57 407 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 TCRBV5S4A2TA0A5A2 114 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 CAP2P40123 477 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 USP5P45974 858 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 PRRT2Q7Z6L0 340 aaPredicted RBP29.06■■■□□ 2.24
MRPL28-205ENST00000447696 EDC3Q96F86 508 aaKnown RBP29.06■■■□□ 2.24
MRPL28-205ENST00000447696 GPATCH3Q96I76 525 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.06■■■□□ 2.24
MRPL28-205ENST00000447696 PALD1Q9ULE6 856 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 PTPN22Q9Y2R2 807 aa29.06■■■□□ 2.24
MRPL28-205ENST00000447696 TLR2O60603 784 aa29.05■■■□□ 2.24
MRPL28-205ENST00000447696 AAMPQ13685 434 aa29.05■■■□□ 2.24
MRPL28-205ENST00000447696 FASTKD5Q7L8L6 764 aaKnown RBP29.05■■■□□ 2.24
MRPL28-205ENST00000447696 PDHXO00330 501 aa29.04■■■□□ 2.24
MRPL28-205ENST00000447696 CRACR2BQ8N4Y2 399 aaPredicted RBP29.04■■■□□ 2.24
MRPL28-205ENST00000447696 TRIM34Q9BYJ4 488 aa29.04■■■□□ 2.24
MRPL28-205ENST00000447696 SAP30BPQ9UHR5 308 aaKnown RBP29.04■■■□□ 2.24
MRPL28-205ENST00000447696 POTEFA5A3E0 1075 aa29.03■■■□□ 2.24
MRPL28-205ENST00000447696 ARMC5Q96C12 935 aa29.03■■■□□ 2.24
MRPL28-205ENST00000447696 CRNKL1Q9BZJ0 848 aaKnown RBP29.03■■■□□ 2.24
MRPL28-205ENST00000447696 DNAJC18Q9H819 358 aa29.03■■■□□ 2.24
MRPL28-205ENST00000447696 GINM1Q9NU53 330 aa29.03■■■□□ 2.24
MRPL28-205ENST00000447696 PHIPQ8WWQ0 1821 aa29.03■■■□□ 2.24
MRPL28-205ENST00000447696 ADD2P35612 726 aa29.02■■■□□ 2.24
MRPL28-205ENST00000447696 RRP1BQ14684 758 aaKnown RBP29.02■■■□□ 2.24
MRPL28-205ENST00000447696 ARHGEF6Q15052 776 aa29.02■■■□□ 2.24
MRPL28-205ENST00000447696 GPAT2Q6NUI2 795 aa29.02■■■□□ 2.24
MRPL28-205ENST00000447696 CD99L2Q8TCZ2 262 aa29.02■■■□□ 2.24
MRPL28-205ENST00000447696 EHD4Q9H223 541 aa29.02■■■□□ 2.24
MRPL28-205ENST00000447696 EFCC1Q9HA90 598 aa29.02■■■□□ 2.24
MRPL28-205ENST00000447696 TTC6Q86TZ1 520 aa29.01■■■□□ 2.23
MRPL28-205ENST00000447696 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.01■■■□□ 2.23
MRPL28-205ENST00000447696 SLC45A1Q9Y2W3 748 aa29.01■■■□□ 2.23
MRPL28-205ENST00000447696 TRIM75PA6NK02 468 aa29■■■□□ 2.23
MRPL28-205ENST00000447696 USP17L5A8MUK1 530 aa29■■■□□ 2.23
MRPL28-205ENST00000447696 ASNSP08243 561 aa29■■■□□ 2.23
MRPL28-205ENST00000447696 PARK7Q99497 189 aaKnown RBP29■■■□□ 2.23
MRPL28-205ENST00000447696 MYH1P12882 1939 aa29■■■□□ 2.23
MRPL28-205ENST00000447696 DDX60LQ5H9U9 1706 aaKnown RBP29■■■□□ 2.23
MRPL28-205ENST00000447696 KIAA0100Q14667 2235 aaKnown RBP29■■■□□ 2.23
MRPL28-205ENST00000447696 ATAD5Q96QE3 1844 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 ADGRA2Q96PE1 1338 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 PTPRFP10586 1907 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 UBE3CQ15386 1083 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 ZSCAN25Q6NSZ9 544 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 ZNF280CQ8ND82 737 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 TMEM106CQ9BVX2 250 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 AS3MTQ9HBK9 375 aa28.99■■■□□ 2.23
MRPL28-205ENST00000447696 HTTP42858 3142 aa28.98■■■□□ 2.23
MRPL28-205ENST00000447696 HDAC1Q13547 482 aaPredicted RBP28.98■■■□□ 2.23
MRPL28-205ENST00000447696 C17orf99Q6UX52 265 aa28.98■■■□□ 2.23
MRPL28-205ENST00000447696 GADL1Q6ZQY3 521 aa28.98■■■□□ 2.23
MRPL28-205ENST00000447696 CCDC84Q86UT8 332 aaPredicted RBP28.98■■■□□ 2.23
MRPL28-205ENST00000447696 SERPINB13Q9UIV8 391 aa28.98■■■□□ 2.23
MRPL28-205ENST00000447696 TTC41PQ6P2S7 1318 aa28.97■■■□□ 2.23
MRPL28-205ENST00000447696 LCORLQ8N3X6 602 aa28.97■■■□□ 2.23
MRPL28-205ENST00000447696 PROCA1Q8NCQ7 364 aaPredicted RBP28.97■■■□□ 2.23
MRPL28-205ENST00000447696 WDR18Q9BV38 432 aa28.97■■■□□ 2.23
MRPL28-205ENST00000447696 RBBP6Q7Z6E9 1792 aaKnown RBP28.97■■■□□ 2.23
MRPL28-205ENST00000447696 SPP2Q13103 211 aa28.96■■■□□ 2.23
MRPL28-205ENST00000447696 AGTPBP1Q9UPW5 1226 aa28.96■■■□□ 2.23
MRPL28-205ENST00000447696 NAV1Q8NEY1 1877 aa28.95■■■□□ 2.23
MRPL28-205ENST00000447696 MBD4O95243 580 aa28.95■■■□□ 2.22
MRPL28-205ENST00000447696 SLC4A8Q2Y0W8 1093 aa28.95■■■□□ 2.22
MRPL28-205ENST00000447696 TATDN1Q6P1N9 297 aa28.95■■■□□ 2.22
MRPL28-205ENST00000447696 NBPF11Q86T75 865 aa28.95■■■□□ 2.22
MRPL28-205ENST00000447696 ARMT1Q9H993 441 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms