RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 CLRN2A0PK11 232 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 EGFRP00533 1210 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 FGRP09769 529 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 TNIP1Q15025 636 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 IL27Q8NEV9 243 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 FAM198AQ9UFP1 575 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 EIF6P56537 245 aaKnown RBP29.32■■■□□ 2.28
RFFL-206ENST00000447669 ZSCAN31Q96LW9 406 aaPredicted RBP29.32■■■□□ 2.28
RFFL-206ENST00000447669 HDAC9Q9UKV0 1011 aa29.32■■■□□ 2.28
RFFL-206ENST00000447669 SPDYE2BA6NHP3 402 aa29.31■■■□□ 2.28
RFFL-206ENST00000447669 SH2B2O14492 632 aaPredicted RBP29.31■■■□□ 2.28
RFFL-206ENST00000447669 SPDYE6P0CI01 402 aa29.31■■■□□ 2.28
RFFL-206ENST00000447669 LMNB1P20700 586 aa29.31■■■□□ 2.28
RFFL-206ENST00000447669 DLGAP5Q15398 846 aa29.31■■■□□ 2.28
RFFL-206ENST00000447669 OSBPL5Q9H0X9 879 aaPredicted RBP29.31■■■□□ 2.28
RFFL-206ENST00000447669 NMT2O60551 498 aa29.3■■■□□ 2.28
RFFL-206ENST00000447669 GMPSP49915 693 aaPredicted RBP29.3■■■□□ 2.28
RFFL-206ENST00000447669 CCT2P78371 535 aaKnown RBP29.3■■■□□ 2.28
RFFL-206ENST00000447669 RBM26Q5T8P6 1007 aaKnown RBP29.3■■■□□ 2.28
RFFL-206ENST00000447669 AMOTL1Q8IY63 956 aa29.3■■■□□ 2.28
RFFL-206ENST00000447669 IFIT3O14879 490 aaKnown RBP29.3■■■□□ 2.28
RFFL-206ENST00000447669 TMEM67Q5HYA8 995 aa29.3■■■□□ 2.28
RFFL-206ENST00000447669 ESR2Q92731 530 aa29.3■■■□□ 2.28
RFFL-206ENST00000447669 SH2B1Q9NRF2 756 aaPredicted RBP29.3■■■□□ 2.28
RFFL-206ENST00000447669 SCAF8Q9UPN6 1271 aaKnown RBP29.3■■■□□ 2.28
RFFL-206ENST00000447669 LY9Q9HBG7 655 aa29.29■■■□□ 2.28
RFFL-206ENST00000447669 NCOA5Q9HCD5 579 aaKnown RBP29.29■■■□□ 2.28
RFFL-206ENST00000447669 SLC3A2P08195 630 aaKnown RBP29.28■■■□□ 2.28
RFFL-206ENST00000447669 PDE4BQ07343 736 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 ANGEL1Q9UNK9 670 aaKnown RBP29.28■■■□□ 2.28
RFFL-206ENST00000447669 DICER1Q9UPY3 1922 aaKnown RBP29.28■■■□□ 2.28
RFFL-206ENST00000447669 WDR19Q8NEZ3 1342 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 KLF18A0A0U1RQI7 1052 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 PPFIA3O75145 1194 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 RXRAP19793 462 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 PDIA3P30101 505 aaKnown RBP29.28■■■□□ 2.28
RFFL-206ENST00000447669 SCRN1Q12765 414 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 PKP1Q13835 747 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 NBPF9Q3BBW0 867 aa29.28■■■□□ 2.28
RFFL-206ENST00000447669 DDTLA6NHG4 134 aaPredicted RBP29.27■■■□□ 2.28
RFFL-206ENST00000447669 TCP10L2B9ZVM9 353 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 ORC4O43929 436 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 SH3BP5LQ7L8J4 393 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 FBXL16Q8N461 479 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 MYL10Q9BUA6 226 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 MKNK2Q9HBH9 465 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 ROBO3Q96MS0 1386 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 CDK8P49336 464 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 IDI2Q9BXS1 227 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 MYOZ2Q9NPC6 264 aa29.27■■■□□ 2.28
RFFL-206ENST00000447669 SAMD7Q7Z3H4 446 aa29.26■■■□□ 2.27
RFFL-206ENST00000447669 TMEM87BQ96K49 555 aa29.26■■■□□ 2.27
RFFL-206ENST00000447669 RNF181Q9P0P0 153 aa29.26■■■□□ 2.27
RFFL-206ENST00000447669 MICALL2Q8IY33 904 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 GTF3C6Q969F1 213 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 INTS4Q96HW7 963 aaKnown RBP29.25■■■□□ 2.27
RFFL-206ENST00000447669 ZNF70Q9UC06 446 aaPredicted RBP29.25■■■□□ 2.27
RFFL-206ENST00000447669 WNT10BO00744 389 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 TFAP4Q01664 338 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 C16orf86Q6ZW13 317 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 HPS5Q9UPZ3 1129 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 TNKSO95271 1327 aa29.25■■■□□ 2.27
RFFL-206ENST00000447669 TSPY2A6NKD2 308 aa29.24■■■□□ 2.27
RFFL-206ENST00000447669 FAM196BA6NMK8 535 aa29.24■■■□□ 2.27
RFFL-206ENST00000447669 RASA1P20936 1047 aa29.24■■■□□ 2.27
RFFL-206ENST00000447669 NFXL1Q6ZNB6 911 aa29.24■■■□□ 2.27
RFFL-206ENST00000447669 ZSCAN29Q8IWY8 852 aaPredicted RBP29.24■■■□□ 2.27
RFFL-206ENST00000447669 UBAC1Q9BSL1 405 aa29.24■■■□□ 2.27
RFFL-206ENST00000447669 VEZTQ9HBM0 779 aa29.24■■■□□ 2.27
RFFL-206ENST00000447669 CNOT7Q9UIV1 285 aaKnown RBP29.24■■■□□ 2.27
RFFL-206ENST00000447669 PFKFB2O60825 505 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 EVCP57679 992 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 CCDC144CPQ8IYA2 1237 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 ENAHQ8N8S7 591 aaPredicted RBP29.23■■■□□ 2.27
RFFL-206ENST00000447669 ZSCAN10Q96SZ4 725 aaPredicted RBP29.23■■■□□ 2.27
RFFL-206ENST00000447669 GOLGA8BA8MQT2 603 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 PCP11498 1178 aaKnown RBP29.23■■■□□ 2.27
RFFL-206ENST00000447669 WTAPQ15007 396 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 SEC23AQ15436 765 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 GPR162Q16538 588 aa29.23■■■□□ 2.27
RFFL-206ENST00000447669 JAK2O60674 1132 aa29.22■■■□□ 2.27
RFFL-206ENST00000447669 ASTN2O75129 1339 aaPredicted RBP29.22■■■□□ 2.27
RFFL-206ENST00000447669 TBC1D10BQ4KMP7 808 aaPredicted RBP29.22■■■□□ 2.27
RFFL-206ENST00000447669 TTC6Q86TZ1 520 aa29.22■■■□□ 2.27
RFFL-206ENST00000447669 ZNF274Q96GC6 653 aaPredicted RBP29.22■■■□□ 2.27
RFFL-206ENST00000447669 CHMP5Q9NZZ3 219 aa29.22■■■□□ 2.27
RFFL-206ENST00000447669 SIPA1L1O43166 1804 aa29.22■■■□□ 2.27
RFFL-206ENST00000447669 GABPAQ06546 454 aa29.21■■■□□ 2.27
RFFL-206ENST00000447669 ZBED3Q96IU2 234 aaPredicted RBP29.21■■■□□ 2.27
RFFL-206ENST00000447669 RPS12P25398 132 aaKnown RBP29.21■■■□□ 2.27
RFFL-206ENST00000447669 SPDYE2Q495Y8 402 aa29.21■■■□□ 2.27
RFFL-206ENST00000447669 C9orf131Q5VYM1 1079 aa29.21■■■□□ 2.27
RFFL-206ENST00000447669 APOA5Q6Q788 366 aa29.21■■■□□ 2.27
RFFL-206ENST00000447669 ZNF444Q8N0Y2 327 aaPredicted RBP29.21■■■□□ 2.27
RFFL-206ENST00000447669 IL17RBQ9NRM6 502 aa29.21■■■□□ 2.27
RFFL-206ENST00000447669 SMC3Q9UQE7 1217 aa29.21■■■□□ 2.27
RFFL-206ENST00000447669 GJB2P29033 226 aa29.2■■■□□ 2.27
RFFL-206ENST00000447669 ZNF280AP59817 542 aaPredicted RBP29.2■■■□□ 2.27
RFFL-206ENST00000447669 MICU3Q86XE3 530 aa29.2■■■□□ 2.27
RFFL-206ENST00000447669 MTMR14Q8NCE2 650 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms