RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 H0YHG0 523 aa21.8■■□□□ 1.08
HMGA1-205ENST00000447654 JAK2O60674 1132 aa21.8■■□□□ 1.08
HMGA1-205ENST00000447654 SARNPP82979 210 aaKnown RBP21.8■■□□□ 1.08
HMGA1-205ENST00000447654 IGSF22Q8N9C0 903 aa21.8■■□□□ 1.08
HMGA1-205ENST00000447654 NAA15Q9BXJ9 866 aaKnown RBP21.8■■□□□ 1.08
HMGA1-205ENST00000447654 SIL1Q9H173 461 aa21.8■■□□□ 1.08
HMGA1-205ENST00000447654 PCDHA7Q9UN72 937 aa21.8■■□□□ 1.08
HMGA1-205ENST00000447654 PARP4Q9UKK3 1724 aaKnown RBP21.79■■□□□ 1.08
HMGA1-205ENST00000447654 ATP5J2-PTCD1G3V325 749 aa21.79■■□□□ 1.08
HMGA1-205ENST00000447654 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
HMGA1-205ENST00000447654 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
HMGA1-205ENST00000447654 ZKSCAN8Q15776 578 aaPredicted RBP21.79■■□□□ 1.08
HMGA1-205ENST00000447654 TOGARAM2Q6ZUX3 1019 aa21.79■■□□□ 1.08
HMGA1-205ENST00000447654 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
HMGA1-205ENST00000447654 KCNG4Q8TDN1 519 aa21.79■■□□□ 1.08
HMGA1-205ENST00000447654 PAGR1Q9BTK6 254 aa21.79■■□□□ 1.08
HMGA1-205ENST00000447654 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
HMGA1-205ENST00000447654 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
HMGA1-205ENST00000447654 SSR1P43307 286 aaKnown RBP21.78■■□□□ 1.08
HMGA1-205ENST00000447654 PUF60Q9UHX1 559 aaKnown RBP21.78■■□□□ 1.08
HMGA1-205ENST00000447654 HPCAL4Q9UM19 191 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 CTAGE9A4FU28 777 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 EIF3HO15372 352 aaKnown RBP eCLIP21.78■■□□□ 1.08
HMGA1-205ENST00000447654 CLASRPQ8N2M8 674 aaKnown RBP21.78■■□□□ 1.08
HMGA1-205ENST00000447654 TC2NQ8N9U0 490 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 MAGEC3Q8TD91 643 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 EAF2Q96CJ1 260 aaPredicted RBP21.78■■□□□ 1.08
HMGA1-205ENST00000447654 ECHDC1Q9NTX5 307 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 TLR7Q9NYK1 1049 aaKnown RBP21.78■■□□□ 1.08
HMGA1-205ENST00000447654 MYO1AQ9UBC5 1043 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 TUBE1Q9UJT0 475 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 SHANK3Q9BYB0 1731 aa21.78■■□□□ 1.08
HMGA1-205ENST00000447654 ANKRD33BA6NCL7 494 aa21.77■■□□□ 1.08
HMGA1-205ENST00000447654 KIAA0754O94854 1291 aa21.77■■□□□ 1.08
HMGA1-205ENST00000447654 ATP1A3P13637 1013 aa21.77■■□□□ 1.08
HMGA1-205ENST00000447654 NEXNQ0ZGT2 675 aa21.77■■□□□ 1.08
HMGA1-205ENST00000447654 N4BP2L2Q92802 583 aaPredicted RBP21.77■■□□□ 1.08
HMGA1-205ENST00000447654 CAPN7Q9Y6W3 813 aa21.77■■□□□ 1.08
HMGA1-205ENST00000447654 NDUFA8P51970 172 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 WWC2Q6AWC2 1192 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 MICALCLQ6ZW33 695 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 ANKRD18AQ8IVF6 992 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 DPF2Q92785 391 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 TRIM6Q9C030 488 aaPredicted RBP21.77■■□□□ 1.07
HMGA1-205ENST00000447654 ZSWIM4Q9H7M6 989 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 ODF2LQ9ULJ1 636 aa21.77■■□□□ 1.07
HMGA1-205ENST00000447654 PFKFB2O60825 505 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 YEATS4O95619 227 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 IL2RBP14784 551 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 AACSQ86V21 672 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 CCDC50Q8IVM0 306 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 COG1Q8WTW3 980 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 PANX2Q96RD6 677 aa21.76■■□□□ 1.07
HMGA1-205ENST00000447654 ZC3H4Q9UPT8 1303 aaKnown RBP21.76■■□□□ 1.07
HMGA1-205ENST00000447654 A0A1B0GUA9 196 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 TARSL2A2RTX5 802 aaKnown RBP21.75■■□□□ 1.07
HMGA1-205ENST00000447654 STK3Q13188 491 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 SPECC1LQ69YQ0 1117 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 CCDC148Q8NFR7 591 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 FBXW7Q969H0 707 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 CCDC8Q9H0W5 538 aaPredicted RBP21.75■■□□□ 1.07
HMGA1-205ENST00000447654 KAT14Q9H8E8 782 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 ARFGEF2Q9Y6D5 1785 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 A1BGP04217 495 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 SMTNP53814 917 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 STIM1Q13586 685 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 BCAS4Q8TDM0 211 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 CAPS2Q9BXY5 557 aa21.75■■□□□ 1.07
HMGA1-205ENST00000447654 RHOXF2BP0C7M4 288 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 NKX1-1Q15270 411 aaPredicted RBP21.74■■□□□ 1.07
HMGA1-205ENST00000447654 TTLL7Q6ZT98 887 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 UBE3BQ7Z3V4 1068 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 RHOXF2Q9BQY4 288 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 MEFVO15553 781 aaPredicted RBP21.74■■□□□ 1.07
HMGA1-205ENST00000447654 NEBLO76041 1014 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 ICA1Q05084 483 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 IQCA1Q86XH1 822 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 OTUD6BQ8N6M0 293 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 GGA2Q9UJY4 613 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 KCPQ6ZWJ8 1503 aa21.74■■□□□ 1.07
HMGA1-205ENST00000447654 MED23Q9ULK4 1368 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 A0A1B0GVL5 298 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 ZEB2O60315 1214 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 DRP2Q13474 957 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 BIRC2Q13490 618 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 USPL1Q5W0Q7 1092 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 ISM2Q6H9L7 571 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 MRPL44Q9H9J2 332 aaKnown RBP21.73■■□□□ 1.07
HMGA1-205ENST00000447654 LAMB4A4D0S4 1761 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 UBR2Q8IWV8 1755 aa21.73■■□□□ 1.07
HMGA1-205ENST00000447654 AFDNP55196 1824 aaKnown RBP21.73■■□□□ 1.07
HMGA1-205ENST00000447654 GOLGA6CA6NDK9 693 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 ERVV-2B6SEH9 535 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 GOLGA6DP0CG33 693 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 RFX5P48382 616 aaPredicted RBP21.72■■□□□ 1.07
HMGA1-205ENST00000447654 GOLGA6AQ9NYA3 693 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 ADGRG1Q9Y653 693 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 RTN2O75298 545 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 ZNF202O95125 648 aa21.72■■□□□ 1.07
HMGA1-205ENST00000447654 CASP7P55210 303 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms