RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 ZNF784Q8NCA9 323 aaPredicted RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 DCPSQ96C86 337 aaKnown RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 GLIS2Q9BZE0 524 aaPredicted RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 CRNKL1Q9BZJ0 848 aaKnown RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 TMOD2Q9NZR1 351 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 FAM198AQ9UFP1 575 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 CCDC171Q6TFL3 1326 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 FAM196BA6NMK8 535 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 USP17L12C9JPN9 530 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 USP17L21D6R901 530 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 FGAP02671 866 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 TDO2P48775 406 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 RBM10P98175 930 aaKnown RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 KRT26Q7Z3Y9 468 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 RNF214Q8ND24 703 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 ZBED3Q96IU2 234 aaPredicted RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 DEFB129Q9H1M3 183 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 ZNF408Q9H9D4 720 aa10.16□□□□□ -0.78
TTC39A-212ENST00000447632 MYO5AQ9Y4I1 1855 aaKnown RBP10.16□□□□□ -0.78
TTC39A-212ENST00000447632 DDTLA6NHG4 134 aaPredicted RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 PATL2C9JE40 543 aaKnown RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 TRAF5O00463 557 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 ZBTB22O15209 634 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 FOXP2O15409 715 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 IFNL3Q8IZI9 196 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 DCP1AQ9NPI6 582 aaPredicted RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 R3HCC1Q9Y3T6 440 aaKnown RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 POLR3DP05423 398 aaPredicted RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 PLCD1P51178 756 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 USP50Q70EL3 339 aaPredicted RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 PNMA8AQ86V59 439 aaPredicted RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 EPB41L4AQ9HCS5 686 aaPredicted RBP10.15□□□□□ -0.78
TTC39A-212ENST00000447632 ZKSCAN5Q9Y2L8 839 aa10.15□□□□□ -0.78
TTC39A-212ENST00000447632 ARAP2Q8WZ64 1704 aa10.15□□□□□ -0.79
TTC39A-212ENST00000447632 PLCG2P16885 1265 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 FOXD4L6Q3SYB3 417 aaPredicted RBP10.14□□□□□ -0.79
TTC39A-212ENST00000447632 FOXD4L3Q6VB84 417 aaPredicted RBP10.14□□□□□ -0.79
TTC39A-212ENST00000447632 SULF1Q8IWU6 871 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 MTMR14Q8NCE2 650 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 DYNLL2Q96FJ2 89 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 UPF3BQ9BZI7 483 aaKnown RBP10.14□□□□□ -0.79
TTC39A-212ENST00000447632 NAPBQ9H115 298 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 MBD3O95983 291 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 MCM2P49736 904 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 NBPF12Q5TAG4 269 aaPredicted RBP10.14□□□□□ -0.79
TTC39A-212ENST00000447632 SH3BP5LQ7L8J4 393 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 DHX37Q8IY37 1157 aaKnown RBP10.14□□□□□ -0.79
TTC39A-212ENST00000447632 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 MYH13Q9UKX3 1938 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 FLT1P17948 1338 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
TTC39A-212ENST00000447632 PRDM1O75626 825 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 CTR9Q6PD62 1173 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 PDCL3Q9H2J4 239 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
TTC39A-212ENST00000447632 PCNTO95613 3336 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 TERF1P54274 439 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 SLC44A5Q8NCS7 719 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 INTS4Q96HW7 963 aaKnown RBP10.13□□□□□ -0.79
TTC39A-212ENST00000447632 CSRNP1Q96S65 589 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 NACAP1Q9BZK3 213 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
TTC39A-212ENST00000447632 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 KIF3CO14782 793 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 ANAPC15P60006 121 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 MOB2Q70IA6 237 aa10.13□□□□□ -0.79
TTC39A-212ENST00000447632 OSBPL5Q9H0X9 879 aaPredicted RBP10.13□□□□□ -0.79
TTC39A-212ENST00000447632 RBM8AQ9Y5S9 174 aaKnown RBP10.13□□□□□ -0.79
TTC39A-212ENST00000447632 KCNA4P22459 653 aa10.12□□□□□ -0.79
TTC39A-212ENST00000447632 MCCP23508 829 aa10.12□□□□□ -0.79
TTC39A-212ENST00000447632 IDI2Q9BXS1 227 aa10.12□□□□□ -0.79
TTC39A-212ENST00000447632 ATP8A2Q9NTI2 1148 aa10.12□□□□□ -0.79
TTC39A-212ENST00000447632 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
TTC39A-212ENST00000447632 GNAT2P19087 354 aa10.12□□□□□ -0.79
TTC39A-212ENST00000447632 RRP12Q5JTH9 1297 aaKnown RBP10.12□□□□□ -0.79
TTC39A-212ENST00000447632 MAP4K1Q92918 833 aa10.12□□□□□ -0.79
TTC39A-212ENST00000447632 CNTNAP1P78357 1384 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 TNNI2P48788 182 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 CDC37L1Q7L3B6 337 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 CRACR2BQ8N4Y2 399 aaPredicted RBP10.11□□□□□ -0.79
TTC39A-212ENST00000447632 FAM151AQ8WW52 585 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 CHMP4CQ96CF2 233 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 IL17RAQ96F46 866 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 DICER1Q9UPY3 1922 aaKnown RBP10.11□□□□□ -0.79
TTC39A-212ENST00000447632 ADAMTSL1Q8N6G6 1762 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 ZNF213O14771 459 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 TNFAIP1Q13829 316 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 COL9A3Q14050 684 aaPredicted RBP10.11□□□□□ -0.79
TTC39A-212ENST00000447632 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
TTC39A-212ENST00000447632 SHROOM1Q2M3G4 852 aaPredicted RBP10.11□□□□□ -0.79
TTC39A-212ENST00000447632 NKX2-3Q8TAU0 364 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 TSPY26PQ9H489 355 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 CCDC39Q9UFE4 941 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
TTC39A-212ENST00000447632 CYP21A2P08686 494 aa10.1□□□□□ -0.79
TTC39A-212ENST00000447632 LDHDQ86WU2 507 aa10.1□□□□□ -0.79
TTC39A-212ENST00000447632 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms