RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 DNAAF4Q8WXU2 420 aa10.08□□□□□ -0.8
LINC02549-201ENST00000445346 PRKRIP1Q9H875 184 aaPredicted RBP10.08□□□□□ -0.8
LINC02549-201ENST00000445346 ELP3Q9H9T3 547 aa10.08□□□□□ -0.8
LINC02549-201ENST00000445346 POLR3EQ9NVU0 708 aa10.08□□□□□ -0.8
LINC02549-201ENST00000445346 LCE2BO14633 110 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 WDHD1O75717 1129 aaPredicted RBP10.07□□□□□ -0.8
LINC02549-201ENST00000445346 RGS20O76081 388 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 IL1R1P14778 569 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 FKBP1AP62942 108 aaKnown RBP10.07□□□□□ -0.8
LINC02549-201ENST00000445346 SLC4A8Q2Y0W8 1093 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 Q3C1V9 767 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 C15orf52Q6ZUT6 534 aaKnown RBP10.07□□□□□ -0.8
LINC02549-201ENST00000445346 RETREG3Q86VR2 466 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 LINS1Q8NG48 757 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 OPTNQ96CV9 577 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 CNNM1Q9NRU3 951 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
LINC02549-201ENST00000445346 GJA5P36382 358 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 CASP7P55210 303 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
LINC02549-201ENST00000445346 CCDC57Q2TAC2 916 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 SLC9C1Q4G0N8 1177 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
LINC02549-201ENST00000445346 LDHAL6AQ6ZMR3 332 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 ARMC5Q96C12 935 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 PTPN18Q99952 460 aa10.06□□□□□ -0.8
LINC02549-201ENST00000445346 ZNF70Q9UC06 446 aaPredicted RBP10.06□□□□□ -0.8
LINC02549-201ENST00000445346 TTF2Q9UNY4 1162 aaKnown RBP10.06□□□□□ -0.8
LINC02549-201ENST00000445346 MYH3P11055 1940 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 TCP10L2B9ZVM9 353 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
LINC02549-201ENST00000445346 TNNI2P48788 182 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 GTF2A2P52657 109 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 MFSD14BQ5SR56 506 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 TDRD3Q9H7E2 651 aaKnown RBP10.05□□□□□ -0.8
LINC02549-201ENST00000445346 CSADQ9Y600 493 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 SSC5DA1L4H1 1573 aa10.05□□□□□ -0.8
LINC02549-201ENST00000445346 CCL15-CCL14A0A0B4J2E2 113 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 LILRB3O75022 631 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 JUNDP17535 347 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 HIBADHP31937 336 aaKnown RBP10.04□□□□□ -0.8
LINC02549-201ENST00000445346 FOXO4P98177 505 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 KIF22Q14807 665 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 CCL15Q16663 113 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 LMBR1LQ6UX01 489 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 VPS37DQ86XT2 251 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 WWC1Q8IX03 1113 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 ZNF594Q96JF6 807 aaPredicted RBP10.04□□□□□ -0.8
LINC02549-201ENST00000445346 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 AOX1Q06278 1338 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 IRS2Q9Y4H2 1338 aa10.04□□□□□ -0.8
LINC02549-201ENST00000445346 KIAA0100Q14667 2235 aaKnown RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 F6X3S4 739 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 FRAT2O75474 233 aaPredicted RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 SLC19A1P41440 591 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 MTMR2Q13614 643 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 VGLL4Q14135 290 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 DZIP1LQ8IYY4 767 aaKnown RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 BRI3BPQ8WY22 251 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 C9orf78Q9NZ63 289 aaPredicted RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 PTCH2Q9Y6C5 1203 aa10.03□□□□□ -0.8
LINC02549-201ENST00000445346 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 ZNF646O15015 1829 aaPredicted RBP10.03□□□□□ -0.8
LINC02549-201ENST00000445346 GGCXP38435 758 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 CRKP46108 304 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 GYG1P46976 350 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 FXR1P51114 621 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC02549-201ENST00000445346 CAP1Q01518 475 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 UBE4AQ14139 1066 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.02□□□□□ -0.81
LINC02549-201ENST00000445346 IL27Q8NEV9 243 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 TDRD7Q8NHU6 1098 aaKnown RBP10.02□□□□□ -0.81
LINC02549-201ENST00000445346 TMEM39BQ9GZU3 492 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 FAM205AQ6ZU69 1335 aa10.02□□□□□ -0.81
LINC02549-201ENST00000445346 GRM8O00222 908 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 VAMP4O75379 141 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 CETPP11597 493 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 BEND3Q5T5X7 828 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 FAM43AQ8N2R8 423 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINC02549-201ENST00000445346 SH3TC2Q8TF17 1288 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 HOOK2Q96ED9 719 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 TEPSINQ96N21 525 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 TMOD2Q9NZR1 351 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 IL16Q14005 1332 aa10.01□□□□□ -0.81
LINC02549-201ENST00000445346 TLR2O60603 784 aa10□□□□□ -0.81
LINC02549-201ENST00000445346 LACTBP83111 547 aaPredicted RBP10□□□□□ -0.81
LINC02549-201ENST00000445346 CHAF1AQ13111 956 aaPredicted RBP10□□□□□ -0.81
LINC02549-201ENST00000445346 SNAPC2Q13487 334 aa10□□□□□ -0.81
LINC02549-201ENST00000445346 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
LINC02549-201ENST00000445346 CAVIN4Q5BKX8 364 aa10□□□□□ -0.81
LINC02549-201ENST00000445346 EPHA10Q5JZY3 1008 aa10□□□□□ -0.81
LINC02549-201ENST00000445346 SLC4A10Q6U841 1118 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms