RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	FRAT2	O75474	233 aa	Predicted RBP	11.61	□□□□□ -0.55
RPE-213	ENST00000445268	ITGB8	P26012	769 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	GCLC	P48506	637 aa	Predicted RBP	11.61	□□□□□ -0.55
RPE-213	ENST00000445268	HHIPL2	Q6UWX4	724 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	LMBR1L	Q6UX01	489 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	FBXO33	Q7Z6M2	555 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	VPS37D	Q86XT2	251 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	TSPYL6	Q8N831	410 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	SOCS4	Q8WXH5	440 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.61	□□□□□ -0.55
RPE-213	ENST00000445268	TIFA	Q96CG3	184 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.61	□□□□□ -0.55
RPE-213	ENST00000445268	CHD7	Q9P2D1	2997 aa		11.61	□□□□□ -0.55
RPE-213	ENST00000445268	XRCC5	P13010	732 aa	Known RBP	11.6	□□□□□ -0.55
RPE-213	ENST00000445268	HMGCS2	P54868	508 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	TFF2	Q03403	129 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	ADGRE1	Q14246	886 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	TMEM31	Q5JXX7	168 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	AKNAD1	Q5T1N1	836 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	GJC2	Q5T442	439 aa	Predicted RBP	11.6	□□□□□ -0.55
RPE-213	ENST00000445268	SH3BP5L	Q7L8J4	393 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	MYH16	Q9H6N6	1097 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	TXNRD2	Q9NNW7	524 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	C11orf16	Q9NQ32	467 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	MORF4L1	Q9UBU8	362 aa		11.6	□□□□□ -0.55
RPE-213	ENST00000445268	LRRFIP2	Q9Y608	721 aa	Known RBP	11.6	□□□□□ -0.55
RPE-213	ENST00000445268	RFX7	Q2KHR2	1363 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	FAM196B	A6NMK8	535 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	DNM1L	O00429	736 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	MRE11	P49959	708 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	KCNQ1	P51787	676 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	CCDC57	Q2TAC2	916 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.59	□□□□□ -0.55
RPE-213	ENST00000445268	USP6NL	Q92738	828 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	APBA2	Q99767	749 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	MRI	Q9BWK5	157 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	PORCN	Q9H237	461 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.59	□□□□□ -0.55
RPE-213	ENST00000445268	FLRT1	Q9NZU1	646 aa		11.59	□□□□□ -0.55
RPE-213	ENST00000445268	DDX20	Q9UHI6	824 aa	Known RBP	11.59	□□□□□ -0.55
RPE-213	ENST00000445268	BMP1	P13497	986 aa		11.58	□□□□□ -0.56
RPE-213	ENST00000445268	IGFBP4	P22692	258 aa		11.58	□□□□□ -0.56
RPE-213	ENST00000445268	PBX2	P40425	430 aa		11.58	□□□□□ -0.56
RPE-213	ENST00000445268	RGS3	P49796	1198 aa		11.58	□□□□□ -0.56
RPE-213	ENST00000445268	SPP2	Q13103	211 aa		11.58	□□□□□ -0.56
RPE-213	ENST00000445268	SLC39A5	Q6ZMH5	540 aa		11.58	□□□□□ -0.56
RPE-213	ENST00000445268	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.58	□□□□□ -0.56	3e-8	■■■■□ 21.2
RPE-213	ENST00000445268	DDTL	A6NHG4	134 aa	Predicted RBP	11.57	□□□□□ -0.56
RPE-213	ENST00000445268	CNGA1	P29973	690 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	RGS2	P41220	211 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	MORN1	Q5T089	497 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	ANO1	Q5XXA6	986 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	GPR142	Q7Z601	462 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.57	□□□□□ -0.56
RPE-213	ENST00000445268	TRMT44	Q8IYL2	757 aa	Known RBP	11.57	□□□□□ -0.56
RPE-213	ENST00000445268	LPAR1	Q92633	364 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	RUNDC1	Q96C34	613 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	USP40	Q9NVE5	1235 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	IFT57	Q9NWB7	429 aa		11.57	□□□□□ -0.56
RPE-213	ENST00000445268	GRXCR1	A8MXD5	290 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	CTNND1	O60716	968 aa	Known RBP	11.56	□□□□□ -0.56
RPE-213	ENST00000445268	MYCN	P04198	464 aa	Predicted RBP	11.56	□□□□□ -0.56
RPE-213	ENST00000445268	PRDX5	P30044	214 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	IRX3	P78415	501 aa	Predicted RBP	11.56	□□□□□ -0.56
RPE-213	ENST00000445268	SNX17	Q15036	470 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	MICALL1	Q8N3F8	863 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	TRPV1	Q8NER1	839 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	LINS1	Q8NG48	757 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	DNAAF4	Q8WXU2	420 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	STK31	Q9BXU1	1019 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	SUGT1	Q9Y2Z0	365 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	NDUFB9	Q9Y6M9	179 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.56	□□□□□ -0.56
RPE-213	ENST00000445268	CACNA1F	O60840	1977 aa		11.56	□□□□□ -0.56
RPE-213	ENST00000445268	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.55	□□□□□ -0.56
RPE-213	ENST00000445268	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.55	□□□□□ -0.56
RPE-213	ENST00000445268	GNAI1	P63096	354 aa		11.55	□□□□□ -0.56
RPE-213	ENST00000445268	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
RPE-213	ENST00000445268	CAVIN4	Q5BKX8	364 aa		11.55	□□□□□ -0.56
RPE-213	ENST00000445268	FERMT2	Q96AC1	680 aa		11.55	□□□□□ -0.56
RPE-213	ENST00000445268	PAGR1	Q9BTK6	254 aa		11.55	□□□□□ -0.56
RPE-213	ENST00000445268	PBX4	Q9BYU1	374 aa		11.55	□□□□□ -0.56
RPE-213	ENST00000445268	DDX4	Q9NQI0	724 aa	Known RBP	11.55	□□□□□ -0.56
RPE-213	ENST00000445268	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.55	□□□□□ -0.56
RPE-213	ENST00000445268	SIPA1L1	O43166	1804 aa		11.55	□□□□□ -0.56
RPE-213	ENST00000445268	KBTBD13	C9JR72	458 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	MAPK4	P31152	587 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	HERVK_113	P62684	666 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	TLE2	Q04725	743 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	FLII	Q13045	1269 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	FKBP5	Q13451	457 aa	Predicted RBP	11.54	□□□□□ -0.56
RPE-213	ENST00000445268	PICALM	Q13492	652 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268		Q3C1V9	767 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	LRRC24	Q50LG9	513 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	CCDC129	Q6ZRS4	1044 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	ZNF280C	Q8ND82	737 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	GPRC5A	Q8NFJ5	357 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	P2RX7	Q99572	595 aa	Known RBP	11.54	□□□□□ -0.56
RPE-213	ENST00000445268	UTY	O14607	1347 aa		11.54	□□□□□ -0.56
RPE-213	ENST00000445268	SMCHD1	A6NHR9	2005 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms