RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CUTAO60888 179 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 NYXQ9GZU5 481 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 VEZTQ9HBM0 779 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 HIP1RO75146 1068 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 BAG6P46379 1132 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 EFCAB13Q8IY85 973 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 PPANQ9NQ55 473 aaKnown RBP20.78■□□□□ 0.92
SHANK3-203ENST00000445220 SPATS2LQ9NUQ6 558 aaKnown RBP20.78■□□□□ 0.92
SHANK3-203ENST00000445220 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 RASSF2P50749 326 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 MRFAP1L1Q96HT8 127 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 SAR1BQ9Y6B6 198 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 RAPGEF1Q13905 1077 aa20.78■□□□□ 0.92
SHANK3-203ENST00000445220 RBBP5Q15291 538 aaKnown RBP20.78■□□□□ 0.92
SHANK3-203ENST00000445220 LRRC8AQ8IWT6 810 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 CCDC51Q96ER9 411 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 TACO1Q9BSH4 297 aaKnown RBP20.77■□□□□ 0.92
SHANK3-203ENST00000445220 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.77■□□□□ 0.92
SHANK3-203ENST00000445220 TSPY3P0CV98 308 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 TSPY8P0CW00 308 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 MCM7P33993 719 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 IL13P35225 146 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 KRT71Q3SY84 523 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 ZNF365Q70YC5 407 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 RNASE9P60153 205 aaKnown RBP20.77■□□□□ 0.92
SHANK3-203ENST00000445220 DDB1Q16531 1140 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 SLF1Q9BQI6 1058 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 CSRNP2Q9H175 543 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 SLAIN2Q9P270 581 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 TXNDC16Q9P2K2 825 aa20.77■□□□□ 0.92
SHANK3-203ENST00000445220 AOX1Q06278 1338 aa20.77■□□□□ 0.91
SHANK3-203ENST00000445220 PCDH11XQ9BZA7 1347 aa20.77■□□□□ 0.91
SHANK3-203ENST00000445220 PCDH11YQ9BZA8 1340 aa20.77■□□□□ 0.91
SHANK3-203ENST00000445220 LUC7L3O95232 432 aaKnown RBP20.76■□□□□ 0.91
SHANK3-203ENST00000445220 NAPAP54920 295 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 MAP7Q14244 749 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 CLUL1Q15846 466 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 HS2ST1Q7LGA3 356 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 VPS52Q8N1B4 723 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 C6orf50Q9HD87 102 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 NIP7Q9Y221 180 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHANK3-203ENST00000445220 MAGEA1P43355 309 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 CWF19L2Q2TBE0 894 aaKnown RBP20.76■□□□□ 0.91
SHANK3-203ENST00000445220 TBC1D31Q96DN5 1066 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 SNCBQ16143 134 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 KRT24Q2M2I5 525 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
SHANK3-203ENST00000445220 WWC3Q9ULE0 1092 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 HGSO14964 777 aaPredicted RBP20.76■□□□□ 0.91
SHANK3-203ENST00000445220 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
SHANK3-203ENST00000445220 PAK1Q13153 545 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 ZNF772Q68DY9 489 aaPredicted RBP20.75■□□□□ 0.91
SHANK3-203ENST00000445220 GDAP1L1Q96MZ0 367 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 SAMM50Q9Y512 469 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 SLC9C1Q4G0N8 1177 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 PSDA5PKW4 1024 aaPredicted RBP20.75■□□□□ 0.91
SHANK3-203ENST00000445220 VWA3AA6NCI4 1184 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 SLC27A2O14975 620 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 RNF40O75150 1001 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 DDX41Q9UJV9 622 aaKnown RBP20.75■□□□□ 0.91
SHANK3-203ENST00000445220 NEO1Q92859 1461 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 PEX19P40855 299 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 INF2Q27J81 1249 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 MUM1Q2TAK8 710 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 KLHL7Q8IXQ5 586 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 RABGGTAQ92696 567 aa20.75■□□□□ 0.91
SHANK3-203ENST00000445220 RAB3IPQ96QF0 476 aaPredicted RBP20.75■□□□□ 0.91
SHANK3-203ENST00000445220 CCDC170Q8IYT3 715 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 GBP7Q8N8V2 638 aaPredicted RBP20.74■□□□□ 0.91
SHANK3-203ENST00000445220 PYCARDQ9ULZ3 195 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 LONRF3Q496Y0 759 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 OTUD7AQ8TE49 926 aaPredicted RBP20.74■□□□□ 0.91
SHANK3-203ENST00000445220 SGSM2O43147 1006 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 RPL13P26373 211 aaKnown RBP20.74■□□□□ 0.91
SHANK3-203ENST00000445220 CDC37L1Q7L3B6 337 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 PDE11AQ9HCR9 933 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 USP21Q9UK80 565 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 CEP104O60308 925 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 PLCD1P51178 756 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 TRIM31Q9BZY9 425 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 PPP2R2CQ9Y2T4 447 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.74■□□□□ 0.91
SHANK3-203ENST00000445220 CHL1O00533 1208 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 CETN3O15182 167 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 PHLDB3Q6NSJ2 640 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 GPT2Q8TD30 523 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 SIRT1Q96EB6 747 aa20.74■□□□□ 0.91
SHANK3-203ENST00000445220 ZNF804AQ7Z570 1209 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 CSGALNACT2Q8N6G5 542 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 HELLSQ9NRZ9 838 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 SBNO2Q9Y2G9 1366 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 STK38LQ9Y2H1 464 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 JRKLQ9Y4A0 524 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 A0A087WUV0 522 aaPredicted RBP20.73■□□□□ 0.91
SHANK3-203ENST00000445220 MAGEB6P1A0A0J9YX57 407 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
SHANK3-203ENST00000445220 USH1CQ9Y6N9 552 aa20.73■□□□□ 0.91
SHANK3-203ENST00000445220 POLR2DO15514 142 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms