RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 FBXO41Q8TF61 875 aa18.24■□□□□ 0.51
SNX13-204ENST00000444712 MASTLQ96GX5 879 aa18.24■□□□□ 0.51
SNX13-204ENST00000444712 POLLQ9UGP5 575 aa18.24■□□□□ 0.51
SNX13-204ENST00000444712 FAM205AQ6ZU69 1335 aa18.24■□□□□ 0.51
SNX13-204ENST00000444712 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
SNX13-204ENST00000444712 MMP10P09238 476 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 ZKSCAN3Q9BRR0 538 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 FAM217BQ9NTX9 383 aaPredicted RBP18.23■□□□□ 0.51
SNX13-204ENST00000444712 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 SUGT1Q9Y2Z0 365 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 FOCADQ5VW36 1801 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 RXRAP19793 462 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 STK11IPQ8N1F8 1099 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 RBSNQ9H1K0 784 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 RBM28Q9NW13 759 aaKnown RBP18.23■□□□□ 0.51
SNX13-204ENST00000444712 ROBO3Q96MS0 1386 aa18.23■□□□□ 0.51
SNX13-204ENST00000444712 IFIT1BQ5T764 474 aaKnown RBP18.22■□□□□ 0.51
SNX13-204ENST00000444712 CATIPQ7Z7H3 387 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 GPR101Q96P66 508 aaPredicted RBP18.22■□□□□ 0.51
SNX13-204ENST00000444712 MYL10Q9BUA6 226 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 NUP62CLQ9H1M0 184 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 MCM9Q9NXL9 1143 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 RTEL1Q9NZ71 1219 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 DDAH1O94760 285 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 KIF23Q02241 960 aaPredicted RBP18.22■□□□□ 0.51
SNX13-204ENST00000444712 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 CCDC144CPQ8IYA2 1237 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 MPNDQ8N594 471 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
SNX13-204ENST00000444712 FAM163AQ96GL9 167 aaPredicted RBP18.22■□□□□ 0.51
SNX13-204ENST00000444712 DDX60LQ5H9U9 1706 aaKnown RBP18.21■□□□□ 0.51
SNX13-204ENST00000444712 CYP2D7A0A087X1C5 515 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 DEXIO95424 95 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 YEATS4O95619 227 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 MFSD14BQ5SR56 506 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
SNX13-204ENST00000444712 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 POLR3EQ9NVU0 708 aa18.21■□□□□ 0.51
SNX13-204ENST00000444712 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
SNX13-204ENST00000444712 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
SNX13-204ENST00000444712 C12orf60Q5U649 245 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 KRT40Q6A162 431 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 KCNG4Q8TDN1 519 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 PHKBQ93100 1093 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 EYA3Q99504 573 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 RTFDC1Q9BY42 306 aaPredicted RBP18.2■□□□□ 0.5
SNX13-204ENST00000444712 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
SNX13-204ENST00000444712 MYH1P12882 1939 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 GPR75-ASB3A0A0A6YYF3 556 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 TPRNQ4KMQ1 711 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 SLC51AQ86UW1 340 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 SH3RF3Q8TEJ3 882 aaPredicted RBP18.2■□□□□ 0.5
SNX13-204ENST00000444712 NUP133Q8WUM0 1156 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 PGBD1Q96JS3 809 aa18.2■□□□□ 0.5
SNX13-204ENST00000444712 RNF26Q9BY78 433 aaPredicted RBP18.2■□□□□ 0.5
SNX13-204ENST00000444712 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNX13-204ENST00000444712 DIXDC1Q155Q3 683 aa18.19■□□□□ 0.5
SNX13-204ENST00000444712 MAP3K11Q16584 847 aa18.19■□□□□ 0.5
SNX13-204ENST00000444712 UVSSAQ2YD98 709 aa18.19■□□□□ 0.5
SNX13-204ENST00000444712 DPP8Q6V1X1 898 aaPredicted RBP18.19■□□□□ 0.5
SNX13-204ENST00000444712 LIG1P18858 919 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 BTDP43251 543 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
SNX13-204ENST00000444712 OTUD7BQ6GQQ9 843 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 CRACR2BQ8N4Y2 399 aaPredicted RBP18.18■□□□□ 0.5
SNX13-204ENST00000444712 PPP1R9BQ96SB3 815 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 STK32BQ9NY57 414 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 GAKO14976 1311 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 EP400Q96L91 3159 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 PRDM1O75626 825 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 CCDC192P0DO97 292 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 XBP1P17861 261 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 CEBPZQ03701 1054 aaKnown RBP18.18■□□□□ 0.5
SNX13-204ENST00000444712 STK38Q15208 465 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 CCDC73Q6ZRK6 1079 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 TNMDQ9H2S6 317 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 CLSTN2Q9H4D0 955 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 DACT1Q9NYF0 836 aa18.18■□□□□ 0.5
SNX13-204ENST00000444712 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
SNX13-204ENST00000444712 H0YIN7 160 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 USP17L8P0C7I0 530 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 U2AF2P26368 475 aaKnown RBP eCLIP18.16■□□□□ 0.52e-9■■■■■ 35.7
SNX13-204ENST00000444712 ME1P48163 572 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 SF3A1Q15459 793 aaKnown RBP18.16■□□□□ 0.5
SNX13-204ENST00000444712 GRIK5Q16478 980 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 TGFBRAP1Q8WUH2 860 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
SNX13-204ENST00000444712 A0A1W2PQ27 194 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 A0A1W2PQ64 194 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 A0A1W2PQD8 194 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms