RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PHF20L1A8MW92 1017 aa21■□□□□ 0.95
SMARCAL1-209ENST00000444508 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
SMARCAL1-209ENST00000444508 NOL9Q5SY16 702 aaKnown RBP21■□□□□ 0.95
SMARCAL1-209ENST00000444508 TTC6Q86TZ1 520 aa21■□□□□ 0.95
SMARCAL1-209ENST00000444508 FOXP4Q8IVH2 680 aaPredicted RBP21■□□□□ 0.95
SMARCAL1-209ENST00000444508 OTUD5Q96G74 571 aa21■□□□□ 0.95
SMARCAL1-209ENST00000444508 DDRGK1Q96HY6 314 aa21■□□□□ 0.95
SMARCAL1-209ENST00000444508 FAM196BA6NMK8 535 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 CA12O43570 354 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 CTNND1O60716 968 aaKnown RBP20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 SLURP2P0DP57 97 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 SLC4A8Q2Y0W8 1093 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 PICK1Q9NRD5 415 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 ATP8A2Q9NTI2 1148 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 MCM9Q9NXL9 1143 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
SMARCAL1-209ENST00000444508 POLR3DP05423 398 aaPredicted RBP20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 GJA5P36382 358 aa20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 INHBEP58166 350 aa20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 SCYL3Q8IZE3 742 aa20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 OSBP2Q969R2 916 aa20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 DCP1AQ9NPI6 582 aaPredicted RBP20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 SIPA1L1O43166 1804 aa20.98■□□□□ 0.95
SMARCAL1-209ENST00000444508 FOXN1O15353 648 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 PRKAB2O43741 272 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 TM4SF4P48230 202 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 CTCFP49711 727 aaPredicted RBP20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 PPATQ06203 517 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 PPIL2Q13356 520 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 AMOTL1Q8IY63 956 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 RILPL2Q969X0 211 aa20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 STRBPQ96SI9 672 aaKnown RBP20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 DDX60LQ5H9U9 1706 aaKnown RBP20.97■□□□□ 0.95
SMARCAL1-209ENST00000444508 DOCK1Q14185 1865 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 LAMB1P07942 1786 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 GTF2A2P52657 109 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 ZMYM1Q5SVZ6 1142 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 CENPQQ7L2Z9 268 aaPredicted RBP20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 METTL16Q86W50 562 aaKnown RBP20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 TICAM2Q86XR7 235 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 EHD4Q9H223 541 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 SERPINB13Q9UIV8 391 aa20.96■□□□□ 0.95
SMARCAL1-209ENST00000444508 M0R2C6 588 aa20.95■□□□□ 0.94
SMARCAL1-209ENST00000444508 GPAA1O43292 621 aa20.95■□□□□ 0.94
SMARCAL1-209ENST00000444508 GNAT2P19087 354 aa20.95■□□□□ 0.94
SMARCAL1-209ENST00000444508 PDE4AP27815 886 aa20.95■□□□□ 0.94
SMARCAL1-209ENST00000444508 SAGE1Q9NXZ1 904 aa20.95■□□□□ 0.94
SMARCAL1-209ENST00000444508 IRF6O14896 467 aa20.94■□□□□ 0.94
SMARCAL1-209ENST00000444508 CAP2P40123 477 aa20.94■□□□□ 0.94
SMARCAL1-209ENST00000444508 SNAPC2Q13487 334 aa20.94■□□□□ 0.94
SMARCAL1-209ENST00000444508 CCDC136Q96JN2 1154 aa20.94■□□□□ 0.94
SMARCAL1-209ENST00000444508 DNAJC18Q9H819 358 aa20.94■□□□□ 0.94
SMARCAL1-209ENST00000444508 RNF186Q9NXI6 227 aa20.94■□□□□ 0.94
SMARCAL1-209ENST00000444508 CCL15-CCL14A0A0B4J2E2 113 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 TRPA1O75762 1119 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 CETPP11597 493 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 PTPRAP18433 802 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 PLCD1P51178 756 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 CCL15Q16663 113 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 OTUD7BQ6GQQ9 843 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 ZHX2Q9Y6X8 837 aa20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 BAZ2AQ9UIF9 1905 aaKnown RBP20.93■□□□□ 0.94
SMARCAL1-209ENST00000444508 ATAD5Q96QE3 1844 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 ALDH1A1P00352 501 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 APPP05067 770 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 GIMAP6Q6P9H5 292 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 IFNL1Q8IU54 200 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 MS4A4AQ96JQ5 239 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 SEC62Q99442 399 aaKnown RBP20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 HELLSQ9NRZ9 838 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 TSKSQ9UJT2 592 aa20.92■□□□□ 0.94
SMARCAL1-209ENST00000444508 TESPA1A2RU30 521 aaPredicted RBP20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 CYP2D6P10635 497 aa20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 HSPA8P11142 646 aaKnown RBP20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 NACAP1Q9BZK3 213 aa20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 GINM1Q9NU53 330 aa20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 ARPP21Q9UBL0 812 aaPredicted RBP20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 TAOK2Q9UL54 1235 aa20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 KCNH4Q9UQ05 1017 aa20.91■□□□□ 0.94
SMARCAL1-209ENST00000444508 GSG1L2A8MUP6 293 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 USP17L12C9JPN9 530 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 USP17L21D6R901 530 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 GDF11O95390 407 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 ASNSP08243 561 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 LBX1P52954 281 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 RRP1BQ14684 758 aaKnown RBP20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 BRI3BPQ8WY22 251 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 TBC1D2Q9BYX2 928 aa20.9■□□□□ 0.94
SMARCAL1-209ENST00000444508 USP17L5A8MUK1 530 aa20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 PATL2C9JE40 543 aaKnown RBP20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 IGF2BP3O00425 579 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 CXCL11O14625 94 aa20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 SDSP20132 328 aa20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 TDO2P48775 406 aa20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 CERKLQ49MI3 558 aaPredicted RBP20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 C12orf60Q5U649 245 aa20.89■□□□□ 0.93
SMARCAL1-209ENST00000444508 TATDN1Q6P1N9 297 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms