RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 METTL16Q86W50 562 aaKnown RBP26.46■■□□□ 1.83
TRAF4-205ENST00000444415 CFHR5Q9BXR6 569 aa26.46■■□□□ 1.83
TRAF4-205ENST00000444415 SAP30BPQ9UHR5 308 aaKnown RBP26.46■■□□□ 1.83
TRAF4-205ENST00000444415 TTC41PQ6P2S7 1318 aa26.46■■□□□ 1.83
TRAF4-205ENST00000444415 MAGEB6P1A0A0J9YX57 407 aa26.45■■□□□ 1.82
TRAF4-205ENST00000444415 PPATQ06203 517 aa26.45■■□□□ 1.82
TRAF4-205ENST00000444415 SCYL3Q8IZE3 742 aa26.45■■□□□ 1.82
TRAF4-205ENST00000444415 BAZ2AQ9UIF9 1905 aaKnown RBP26.45■■□□□ 1.82
TRAF4-205ENST00000444415 SLC4A8Q2Y0W8 1093 aa26.44■■□□□ 1.82
TRAF4-205ENST00000444415 CERS3Q8IU89 383 aa26.44■■□□□ 1.82
TRAF4-205ENST00000444415 GPATCH3Q96I76 525 aa26.44■■□□□ 1.82
TRAF4-205ENST00000444415 DHX36Q9H2U1 1008 aaKnown RBP26.44■■□□□ 1.82
TRAF4-205ENST00000444415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.44■■□□□ 1.82
TRAF4-205ENST00000444415 CCL15-CCL14A0A0B4J2E2 113 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 MX1P20591 662 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 EVX2Q03828 476 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 MOGSQ13724 837 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 CCL15Q16663 113 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 KBTBD3Q8NAB2 608 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 PI4KBQ9UBF8 816 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 KCNH4Q9UQ05 1017 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 CENPFP49454 3210 aa26.43■■□□□ 1.82
TRAF4-205ENST00000444415 PTPRAP18433 802 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 GTF2A2P52657 109 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 UBE3CQ15386 1083 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 CCDC84Q86UT8 332 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-205ENST00000444415 ARMT1Q9H993 441 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 CTNND1O60716 968 aaKnown RBP26.42■■□□□ 1.82
TRAF4-205ENST00000444415 JAG1P78504 1218 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 SHROOM1Q2M3G4 852 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-205ENST00000444415 FAM43AQ8N2R8 423 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 SDR42E1Q8WUS8 393 aa26.42■■□□□ 1.82
TRAF4-205ENST00000444415 PUS7LQ9H0K6 701 aaKnown RBP26.42■■□□□ 1.82
TRAF4-205ENST00000444415 RWDD1Q9H446 243 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-205ENST00000444415 HERC5Q9UII4 1024 aaKnown RBP26.42■■□□□ 1.82
TRAF4-205ENST00000444415 USP5P45974 858 aa26.41■■□□□ 1.82
TRAF4-205ENST00000444415 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.41■■□□□ 1.822e-8■■□□□ 13.1
TRAF4-205ENST00000444415 PRKAB2O43741 272 aa26.4■■□□□ 1.82
TRAF4-205ENST00000444415 MBD4O95243 580 aa26.4■■□□□ 1.82
TRAF4-205ENST00000444415 TNS4Q8IZW8 715 aa26.4■■□□□ 1.82
TRAF4-205ENST00000444415 LNPKQ9C0E8 428 aa26.4■■□□□ 1.82
TRAF4-205ENST00000444415 STAP2Q9UGK3 403 aa26.4■■□□□ 1.82
TRAF4-205ENST00000444415 GLRX3O76003 335 aaKnown RBP26.39■■□□□ 1.82
TRAF4-205ENST00000444415 SNAPC2Q13487 334 aa26.39■■□□□ 1.82
TRAF4-205ENST00000444415 AFG3L2Q9Y4W6 797 aa26.39■■□□□ 1.82
TRAF4-205ENST00000444415 BTBD19C9JJ37 291 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 ALDH1A1P00352 501 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 CAP2P40123 477 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 PLCD1P51178 756 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 PDE1AP54750 535 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 CRHR2Q13324 411 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 B4GALNT3Q6L9W6 998 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 ZNF296Q8WUU4 475 aaPredicted RBP26.38■■□□□ 1.81
TRAF4-205ENST00000444415 CRNKL1Q9BZJ0 848 aaKnown RBP26.38■■□□□ 1.81
TRAF4-205ENST00000444415 DCP1AQ9NPI6 582 aaPredicted RBP26.38■■□□□ 1.81
TRAF4-205ENST00000444415 ZHX2Q9Y6X8 837 aa26.38■■□□□ 1.81
TRAF4-205ENST00000444415 GPR25O00155 361 aa26.37■■□□□ 1.81
TRAF4-205ENST00000444415 ERC2O15083 957 aa26.37■■□□□ 1.81
TRAF4-205ENST00000444415 NOM1Q5C9Z4 860 aaKnown RBP26.37■■□□□ 1.81
TRAF4-205ENST00000444415 FOXP4Q8IVH2 680 aaPredicted RBP26.37■■□□□ 1.81
TRAF4-205ENST00000444415 OSBP2Q969R2 916 aa26.37■■□□□ 1.81
TRAF4-205ENST00000444415 CETPP11597 493 aa26.36■■□□□ 1.81
TRAF4-205ENST00000444415 NUCB1Q02818 461 aa26.36■■□□□ 1.81
TRAF4-205ENST00000444415 PICK1Q9NRD5 415 aa26.36■■□□□ 1.81
TRAF4-205ENST00000444415 SMIM22K7EJ46 135 aa26.36■■□□□ 1.81
TRAF4-205ENST00000444415 EHD4Q9H223 541 aa26.36■■□□□ 1.81
TRAF4-205ENST00000444415 LOC285556D6RIA3 1793 aa26.35■■□□□ 1.81
TRAF4-205ENST00000444415 HLA-DOAP06340 250 aa26.35■■□□□ 1.81
TRAF4-205ENST00000444415 GABPAQ06546 454 aa26.35■■□□□ 1.81
TRAF4-205ENST00000444415 ZSCAN25Q6NSZ9 544 aa26.35■■□□□ 1.81
TRAF4-205ENST00000444415 A0A0G2JLL6 359 aaPredicted RBP26.34■■□□□ 1.81
TRAF4-205ENST00000444415 CXCL11O14625 94 aa26.34■■□□□ 1.81
TRAF4-205ENST00000444415 RNF113AO15541 343 aaKnown RBP26.34■■□□□ 1.81
TRAF4-205ENST00000444415 CYP2D6P10635 497 aa26.34■■□□□ 1.81
TRAF4-205ENST00000444415 TATDN1Q6P1N9 297 aa26.34■■□□□ 1.81
TRAF4-205ENST00000444415 PRRT2Q7Z6L0 340 aaPredicted RBP26.34■■□□□ 1.81
TRAF4-205ENST00000444415 CHD1LQ86WJ1 897 aa26.34■■□□□ 1.81
TRAF4-205ENST00000444415 GDF11O95390 407 aa26.33■■□□□ 1.81
TRAF4-205ENST00000444415 CAP1Q01518 475 aa26.33■■□□□ 1.81
TRAF4-205ENST00000444415 GPAT2Q6NUI2 795 aa26.33■■□□□ 1.81
TRAF4-205ENST00000444415 CRACR2BQ8N4Y2 399 aaPredicted RBP26.33■■□□□ 1.81
TRAF4-205ENST00000444415 APPBP2Q92624 585 aa26.33■■□□□ 1.81
TRAF4-205ENST00000444415 MCM9Q9NXL9 1143 aa26.33■■□□□ 1.81
TRAF4-205ENST00000444415 SERPINB13Q9UIV8 391 aa26.33■■□□□ 1.81
TRAF4-205ENST00000444415 BRCA2P51587 3418 aa26.33■■□□□ 1.8
TRAF4-205ENST00000444415 M0R2C6 588 aa26.32■■□□□ 1.8
TRAF4-205ENST00000444415 OTUD7BQ6GQQ9 843 aa26.32■■□□□ 1.8
TRAF4-205ENST00000444415 STRBPQ96SI9 672 aaKnown RBP26.32■■□□□ 1.8
TRAF4-205ENST00000444415 MYH8P13535 1937 aa26.32■■□□□ 1.8
TRAF4-205ENST00000444415 ZSWIM8A7E2V4 1837 aa26.32■■□□□ 1.8
TRAF4-205ENST00000444415 SHMT1P34896 483 aa26.31■■□□□ 1.8
TRAF4-205ENST00000444415 SEC62Q99442 399 aaKnown RBP26.31■■□□□ 1.8
TRAF4-205ENST00000444415 ZBTB47Q9UFB7 747 aaPredicted RBP26.31■■□□□ 1.8
TRAF4-205ENST00000444415 TRIM75PA6NK02 468 aa26.3■■□□□ 1.8
TRAF4-205ENST00000444415 DGKZQ13574 1117 aa26.3■■□□□ 1.8
TRAF4-205ENST00000444415 TAF1CQ15572 869 aaPredicted RBP26.3■■□□□ 1.8
TRAF4-205ENST00000444415 ANKRD23Q86SG2 305 aa26.3■■□□□ 1.8
TRAF4-205ENST00000444415 TTC6Q86TZ1 520 aa26.3■■□□□ 1.8
TRAF4-205ENST00000444415 PLEKHM2Q8IWE5 1019 aa26.3■■□□□ 1.8
TRAF4-205ENST00000444415 ZCCHC17Q9NP64 241 aaKnown RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms