RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.89
AP1S3-207ENST00000444408 ZNF341Q9BYN7 854 aa20.64■□□□□ 0.89
AP1S3-207ENST00000444408 DCP1AQ9NPI6 582 aaPredicted RBP20.64■□□□□ 0.89
AP1S3-207ENST00000444408 SLC4A4Q9Y6R1 1079 aa20.64■□□□□ 0.89
AP1S3-207ENST00000444408 SIPA1L1O43166 1804 aa20.64■□□□□ 0.89
AP1S3-207ENST00000444408 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
AP1S3-207ENST00000444408 MAP3K9P80192 1104 aa20.63■□□□□ 0.89
AP1S3-207ENST00000444408 NMIQ13287 307 aaPredicted RBP20.63■□□□□ 0.89
AP1S3-207ENST00000444408 VGLL4Q14135 290 aa20.63■□□□□ 0.89
AP1S3-207ENST00000444408 RRP1BQ14684 758 aaKnown RBP20.63■□□□□ 0.89
AP1S3-207ENST00000444408 DNAJC18Q9H819 358 aa20.63■□□□□ 0.89
AP1S3-207ENST00000444408 ELP3Q9H9T3 547 aa20.63■□□□□ 0.89
AP1S3-207ENST00000444408 CYP2D7A0A087X1C5 515 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 PHF20L1A8MW92 1017 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 SLC10A3P09131 477 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 MAP2K2P36507 400 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 PLCD1P51178 756 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 MAP3K10Q02779 954 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 LRRFIP1Q32MZ4 808 aaKnown RBP20.62■□□□□ 0.89
AP1S3-207ENST00000444408 ANKRD13AQ8IZ07 590 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 HOOK2Q96ED9 719 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 MCM9Q9NXL9 1143 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 ZNF112Q9UJU3 913 aa20.62■□□□□ 0.89
AP1S3-207ENST00000444408 DDX60LQ5H9U9 1706 aaKnown RBP20.61■□□□□ 0.89
AP1S3-207ENST00000444408 GSG1L2A8MUP6 293 aa20.61■□□□□ 0.89
AP1S3-207ENST00000444408 GJA5P36382 358 aa20.61■□□□□ 0.89
AP1S3-207ENST00000444408 SLC10A4Q96EP9 437 aa20.61■□□□□ 0.89
AP1S3-207ENST00000444408 DHX36Q9H2U1 1008 aaKnown RBP20.61■□□□□ 0.89
AP1S3-207ENST00000444408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
AP1S3-207ENST00000444408 EPB41L4AQ9HCS5 686 aaPredicted RBP20.61■□□□□ 0.89
AP1S3-207ENST00000444408 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.61■□□□□ 0.89
AP1S3-207ENST00000444408 PI4KBQ9UBF8 816 aa20.61■□□□□ 0.89
AP1S3-207ENST00000444408 SNCAIPQ9Y6H5 919 aa20.61■□□□□ 0.89
AP1S3-207ENST00000444408 FOXP2O15409 715 aa20.6■□□□□ 0.89
AP1S3-207ENST00000444408 SHROOM1Q2M3G4 852 aaPredicted RBP20.6■□□□□ 0.89
AP1S3-207ENST00000444408 NAV1Q8NEY1 1877 aa20.6■□□□□ 0.89
AP1S3-207ENST00000444408 TBC1D12O60347 775 aa20.59■□□□□ 0.89
AP1S3-207ENST00000444408 POLR3DP05423 398 aaPredicted RBP20.59■□□□□ 0.89
AP1S3-207ENST00000444408 JAG1P78504 1218 aa20.59■□□□□ 0.89
AP1S3-207ENST00000444408 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
AP1S3-207ENST00000444408 ZNF589Q86UQ0 364 aaPredicted RBP20.59■□□□□ 0.89
AP1S3-207ENST00000444408 CCDC102AQ96A19 550 aa20.59■□□□□ 0.89
AP1S3-207ENST00000444408 ATP8A2Q9NTI2 1148 aa20.59■□□□□ 0.89
AP1S3-207ENST00000444408 MYH1P12882 1939 aa20.59■□□□□ 0.89
AP1S3-207ENST00000444408 USP17L12C9JPN9 530 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 USP17L21D6R901 530 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 KIF23Q02241 960 aaPredicted RBP20.58■□□□□ 0.89
AP1S3-207ENST00000444408 SPRYD7Q5W111 196 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 CCDC84Q86UT8 332 aaPredicted RBP20.58■□□□□ 0.89
AP1S3-207ENST00000444408 WNK4Q96J92 1243 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 IL25Q9H293 177 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 CSADQ9Y600 493 aa20.58■□□□□ 0.89
AP1S3-207ENST00000444408 CA12O43570 354 aa20.57■□□□□ 0.88
AP1S3-207ENST00000444408 HLA-DOAP06340 250 aa20.57■□□□□ 0.88
AP1S3-207ENST00000444408 CTR9Q6PD62 1173 aa20.57■□□□□ 0.88
AP1S3-207ENST00000444408 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
AP1S3-207ENST00000444408 METTL16Q86W50 562 aaKnown RBP20.57■□□□□ 0.88
AP1S3-207ENST00000444408 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
AP1S3-207ENST00000444408 CRACR2BQ8N4Y2 399 aaPredicted RBP20.57■□□□□ 0.88
AP1S3-207ENST00000444408 SLC44A5Q8NCS7 719 aa20.57■□□□□ 0.88
AP1S3-207ENST00000444408 OPTNQ96CV9 577 aa20.57■□□□□ 0.88
AP1S3-207ENST00000444408 DYNLL2Q96FJ2 89 aa20.57■□□□□ 0.88
AP1S3-207ENST00000444408 APPP05067 770 aa20.56■□□□□ 0.88
AP1S3-207ENST00000444408 NOGQ13253 232 aa20.56■□□□□ 0.88
AP1S3-207ENST00000444408 MCMDC2Q4G0Z9 681 aa20.56■□□□□ 0.88
AP1S3-207ENST00000444408 TTC6Q86TZ1 520 aa20.56■□□□□ 0.88
AP1S3-207ENST00000444408 OTUD5Q96G74 571 aa20.56■□□□□ 0.88
AP1S3-207ENST00000444408 DIAPH3Q9NSV4 1193 aa20.56■□□□□ 0.88
AP1S3-207ENST00000444408 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
AP1S3-207ENST00000444408 BAZ2AQ9UIF9 1905 aaKnown RBP20.56■□□□□ 0.88
AP1S3-207ENST00000444408 UNCXA6NJT0 531 aa20.55■□□□□ 0.88
AP1S3-207ENST00000444408 CCDC85CA6NKD9 419 aa20.55■□□□□ 0.88
AP1S3-207ENST00000444408 PATL2C9JE40 543 aaKnown RBP20.55■□□□□ 0.88
AP1S3-207ENST00000444408 GABPAQ06546 454 aa20.55■□□□□ 0.88
AP1S3-207ENST00000444408 NOL9Q5SY16 702 aaKnown RBP20.55■□□□□ 0.88
AP1S3-207ENST00000444408 C12orf60Q5U649 245 aa20.55■□□□□ 0.88
AP1S3-207ENST00000444408 IFNL3Q8IZI9 196 aa20.55■□□□□ 0.88
AP1S3-207ENST00000444408 SERPINB13Q9UIV8 391 aa20.55■□□□□ 0.88
AP1S3-207ENST00000444408 SPDYE5A6NIY4 337 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 GDF11O95390 407 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 SLC34A2O95436 690 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 GNAT2P19087 354 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 SHMT1P34896 483 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 RGS19P49795 217 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 SCYL3Q8IZE3 742 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 STK11IPQ8N1F8 1099 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 EHD4Q9H223 541 aa20.54■□□□□ 0.88
AP1S3-207ENST00000444408 CTNND1O60716 968 aaKnown RBP20.53■□□□□ 0.88
AP1S3-207ENST00000444408 CHMLP26374 656 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 CAP2P40123 477 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 TDO2P48775 406 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 MLLT1Q03111 559 aaPredicted RBP20.53■□□□□ 0.88
AP1S3-207ENST00000444408 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 ERO1BQ86YB8 467 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 TRIM34Q9BYJ4 488 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
AP1S3-207ENST00000444408 MINDY4BA8MYZ0 360 aa20.52■□□□□ 0.88
AP1S3-207ENST00000444408 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.88
AP1S3-207ENST00000444408 GIMAP6Q6P9H5 292 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms