RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 ANKRD18BA2A2Z9 1011 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 MSCO60682 206 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 RAG1P15918 1043 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 USP6NLQ92738 828 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 PHOX2BQ99453 314 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 ASCC2Q9H1I8 757 aaPredicted RBP18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
SYNCRIP-203ENST00000444272 PEX10O60683 326 aa18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 NFIAQ12857 509 aa18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 APBA2Q99767 749 aa18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 KCNH6Q9H252 994 aa18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 CD320Q9NPF0 282 aa18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
SYNCRIP-203ENST00000444272 KBTBD13C9JR72 458 aa18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 CSF1RP07333 972 aa18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 CLTBP09497 229 aa18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 TLE2Q04725 743 aa18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.54e-6■□□□□ 10.4
SYNCRIP-203ENST00000444272 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 GBF1Q92538 1859 aa18.2■□□□□ 0.5
SYNCRIP-203ENST00000444272 ATRNL1Q5VV63 1379 aa18.19■□□□□ 0.5
SYNCRIP-203ENST00000444272 H7C1W4 665 aa18.19■□□□□ 0.5
SYNCRIP-203ENST00000444272 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYNCRIP-203ENST00000444272 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
SYNCRIP-203ENST00000444272 HERVK_113Q902F9 699 aa18.19■□□□□ 0.5
SYNCRIP-203ENST00000444272 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
SYNCRIP-203ENST00000444272 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 MORN1Q5T089 497 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 MFSD14CQ5VZR4 134 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 TBC1D22AQ8WUA7 517 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 FERMT2Q96AC1 680 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 MRIQ9BWK5 157 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 NKX2-4Q9H2Z4 354 aa18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 LRRFIP2Q9Y608 721 aaKnown RBP18.18■□□□□ 0.5
SYNCRIP-203ENST00000444272 SPTBN4Q9H254 2564 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 KIAA0355O15063 1070 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 FLRT1Q9NZU1 646 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 FAM198AQ9UFP1 575 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 MSRAQ9UJ68 235 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 UTYO14607 1347 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 MAST3O60307 1309 aa18.17■□□□□ 0.5
SYNCRIP-203ENST00000444272 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 SLURP2P0DP57 97 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 MAPK4P31152 587 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 ADCYAP1R1P41586 468 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 HMGCS2P54868 508 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 C1orf53Q5VUE5 145 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 ZFPM1Q8IX07 1006 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 SLC28A3Q9HAS3 691 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 TXNRD2Q9NNW7 524 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 COG5Q9UP83 839 aa18.16■□□□□ 0.5
SYNCRIP-203ENST00000444272 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
SYNCRIP-203ENST00000444272 RAB30Q15771 203 aa18.15■□□□□ 0.5
SYNCRIP-203ENST00000444272 ANO1Q5XXA6 986 aa18.15■□□□□ 0.5
SYNCRIP-203ENST00000444272 CDC42EP5Q6NZY7 148 aa18.15■□□□□ 0.5
SYNCRIP-203ENST00000444272 GPRC5AQ8NFJ5 357 aa18.15■□□□□ 0.5
SYNCRIP-203ENST00000444272 PORCNQ9H237 461 aa18.15■□□□□ 0.5
SYNCRIP-203ENST00000444272 PRRC2BQ5JSZ5 2229 aaKnown RBP18.14■□□□□ 0.49
SYNCRIP-203ENST00000444272 CTNND1O60716 968 aaKnown RBP18.14■□□□□ 0.49
SYNCRIP-203ENST00000444272 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
SYNCRIP-203ENST00000444272 IFIT5Q13325 482 aaKnown RBP18.14■□□□□ 0.49
SYNCRIP-203ENST00000444272 PLEKHH3Q7Z736 793 aa18.14■□□□□ 0.49
SYNCRIP-203ENST00000444272 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
SYNCRIP-203ENST00000444272 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 SPP2Q13103 211 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 TRPV1Q8NER1 839 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 EDC3Q96F86 508 aaKnown RBP18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 TMEM39AQ9NV64 488 aa18.13■□□□□ 0.49
SYNCRIP-203ENST00000444272 DCHS1Q96JQ0 3298 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 PQBP1O60828 265 aaKnown RBP18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 CYP2C19P33261 490 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 MAP2K5Q13163 448 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 RASIP1Q5U651 963 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 ZNF594Q96JF6 807 aaPredicted RBP18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 YBX2Q9Y2T7 364 aaKnown RBP18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 ZNF318Q5VUA4 2279 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 A0A0G2JMZ2 1700 aa18.12■□□□□ 0.49
SYNCRIP-203ENST00000444272 CASP7P55210 303 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms