RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
COMMD1-203ENST00000444166 LHX8Q68G74 356 aa12.63□□□□□ -0.39
COMMD1-203ENST00000444166 FAM161BQ96MY7 647 aa12.63□□□□□ -0.39
COMMD1-203ENST00000444166 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
COMMD1-203ENST00000444166 TBC1D12O60347 775 aa12.62□□□□□ -0.39
COMMD1-203ENST00000444166 XRCC5P13010 732 aaKnown RBP12.62□□□□□ -0.39
COMMD1-203ENST00000444166 RFX5P48382 616 aaPredicted RBP12.62□□□□□ -0.39
COMMD1-203ENST00000444166 SPP2Q13103 211 aa12.62□□□□□ -0.39
COMMD1-203ENST00000444166 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
COMMD1-203ENST00000444166 CDX2Q99626 313 aaPredicted RBP12.62□□□□□ -0.39
COMMD1-203ENST00000444166 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 EYA2O00167 538 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 CYP2B6P20813 491 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 HMGCS2P54868 508 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 CACNB2Q08289 660 aaPredicted RBP12.61□□□□□ -0.39
COMMD1-203ENST00000444166 SH3D19Q5HYK7 790 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 ZNF280CQ8ND82 737 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 MAFAQ8NHW3 353 aaPredicted RBP12.61□□□□□ -0.39
COMMD1-203ENST00000444166 SOCS4Q8WXH5 440 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 USP6NLQ92738 828 aa12.61□□□□□ -0.39
COMMD1-203ENST00000444166 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
COMMD1-203ENST00000444166 SEMA3EO15041 775 aa12.6□□□□□ -0.39
COMMD1-203ENST00000444166 PABPC4Q13310 644 aaKnown RBP eCLIP12.6□□□□□ -0.39
COMMD1-203ENST00000444166 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
COMMD1-203ENST00000444166 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
COMMD1-203ENST00000444166 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
COMMD1-203ENST00000444166 BDP1A6H8Y1 2624 aa12.6□□□□□ -0.39
COMMD1-203ENST00000444166 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
COMMD1-203ENST00000444166 CCND3P30281 292 aaPredicted RBP12.59□□□□□ -0.39
COMMD1-203ENST00000444166 PHKA1P46020 1223 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 RHBDL3P58872 404 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
COMMD1-203ENST00000444166 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
COMMD1-203ENST00000444166 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 TXNRD2Q9NNW7 524 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
COMMD1-203ENST00000444166 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 LTBP2Q14767 1821 aa12.59□□□□□ -0.39
COMMD1-203ENST00000444166 FRMPD3Q5JV73 1810 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 PEX10O60683 326 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 ZKSCAN1P17029 563 aaPredicted RBP12.58□□□□□ -0.4
COMMD1-203ENST00000444166 BTDP43251 543 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 PICALMQ13492 652 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 CCL14Q16627 93 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 MORN1Q5T089 497 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
COMMD1-203ENST00000444166 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
COMMD1-203ENST00000444166 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
COMMD1-203ENST00000444166 CAP2P40123 477 aa12.57□□□□□ -0.4
COMMD1-203ENST00000444166 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
COMMD1-203ENST00000444166 GPRC5AQ8NFJ5 357 aa12.57□□□□□ -0.4
COMMD1-203ENST00000444166 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
COMMD1-203ENST00000444166 P2RX7Q99572 595 aaKnown RBP12.57□□□□□ -0.4
COMMD1-203ENST00000444166 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
COMMD1-203ENST00000444166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
COMMD1-203ENST00000444166 MROH7-TTC4A0A0A0MT08 1334 aa12.57□□□□□ -0.4
COMMD1-203ENST00000444166 PDS5AQ29RF7 1337 aaKnown RBP12.57□□□□□ -0.4
COMMD1-203ENST00000444166 GPR75-ASB3A0A0A6YYF3 556 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 CIAO1O76071 339 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 MAPK4P31152 587 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 HERVK_113P62684 666 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
COMMD1-203ENST00000444166 RASGRF1Q13972 1273 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 POTEEQ6S8J3 1075 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 DZIP1Q86YF9 867 aaKnown RBP12.56□□□□□ -0.4
COMMD1-203ENST00000444166 MYLIPQ8WY64 445 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 APBA2Q99767 749 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 WDR18Q9BV38 432 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 PORCNQ9H237 461 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 RBPJLQ9UBG7 517 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
COMMD1-203ENST00000444166 COL9A1P20849 921 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 ADORA1P30542 326 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 RGS2P41220 211 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 BACE1P56817 501 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 PDE3AQ14432 1141 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 SHHQ15465 462 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 Q3C1V9 767 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 CCDC102BQ68D86 513 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 GPR142Q7Z601 462 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 SLF2Q8IX21 1173 aa12.55□□□□□ -0.4
COMMD1-203ENST00000444166 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
COMMD1-203ENST00000444166 SENP6Q9GZR1 1112 aaPredicted RBP12.55□□□□□ -0.4
COMMD1-203ENST00000444166 ERVK-9P63128 1117 aa12.54□□□□□ -0.4
COMMD1-203ENST00000444166 ERVK-24P63145 666 aa12.54□□□□□ -0.4
COMMD1-203ENST00000444166 SMAD3P84022 425 aaKnown RBP12.54□□□□□ -0.4
COMMD1-203ENST00000444166 MTMR2Q13614 643 aa12.54□□□□□ -0.4
COMMD1-203ENST00000444166 AS3MTQ9HBK9 375 aa12.54□□□□□ -0.4
COMMD1-203ENST00000444166 CEP126Q9P2H0 1117 aa12.54□□□□□ -0.4
COMMD1-203ENST00000444166 RLFQ13129 1914 aa12.53□□□□□ -0.4
COMMD1-203ENST00000444166 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms