RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
FN1-211ENST00000443816 HAUS7Q99871 368 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 TRAF5O00463 557 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 CDC42BPBQ9Y5S2 1711 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 NSRP1Q9H0G5 558 aaKnown RBP12.56□□□□□ -0.4
FN1-211ENST00000443816 SAMD9LQ8IVG5 1584 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 SYNMO15061 1565 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 MCF2L2Q86YR7 1114 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 SH3BP5O60239 455 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 ZNF174Q15697 407 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
FN1-211ENST00000443816 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 E7EVH7 732 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 LGR6Q9HBX8 967 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 CHMLP26374 656 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 INTS4Q96HW7 963 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 ABCA8O94911 1581 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 TRIM37O94972 964 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 IWS1Q96ST2 819 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 CARD14Q9BXL6 1004 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 KDM3AQ9Y4C1 1321 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 CFBP00751 764 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 PAIP2Q9BPZ3 127 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 DDX39AO00148 427 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 CNGA1P29973 690 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 RAPGEF1Q13905 1077 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 SEL1L2Q5TEA6 688 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 AOPEPQ8N6M6 819 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 ATP10DQ9P241 1426 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 PZPP20742 1482 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 YWHAEP62258 255 aaKnown RBP12.55□□□□□ -0.4
FN1-211ENST00000443816 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 KRT27Q7Z3Y8 459 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 PAGR1Q9BTK6 254 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 ZNF532Q9HCE3 1301 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 NPC1L1Q9UHC9 1359 aa12.55□□□□□ -0.4
FN1-211ENST00000443816 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 PLEKHG1Q9ULL1 1385 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
FN1-211ENST00000443816 KBTBD3Q8NAB2 608 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 SNX21Q969T3 373 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 MRPL11Q9Y3B7 192 aaKnown RBP12.54□□□□□ -0.4
FN1-211ENST00000443816 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
FN1-211ENST00000443816 OSBPP22059 807 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
FN1-211ENST00000443816 TBC1D31Q96DN5 1066 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 KRT9P35527 623 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 CCNA1P78396 465 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 GLG1Q92896 1179 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 PLIN2Q99541 437 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 SYT1P21579 422 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 NSMFQ6X4W1 530 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
FN1-211ENST00000443816 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 GCNT3O95395 438 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 TMOD1P28289 359 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 SIK1P57059 783 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 DACT1Q9NYF0 836 aa12.54□□□□□ -0.4
FN1-211ENST00000443816 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 BCRP11274 1271 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 PHKG2P15735 406 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
FN1-211ENST00000443816 MYCT1Q8N699 235 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
FN1-211ENST00000443816 THRAP3Q9Y2W1 955 aaKnown RBP12.53□□□□□ -0.4
FN1-211ENST00000443816 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
FN1-211ENST00000443816 PDE4DQ08499 809 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 CDC37L1Q7L3B6 337 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 MTRF1LQ9UGC7 380 aaKnown RBP12.53□□□□□ -0.4
FN1-211ENST00000443816 FAM135BQ49AJ0 1406 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms