RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 POLR2DO15514 142 aaKnown RBP11.47□□□□□ -0.57
LIN54-202ENST00000442461 EVI5O60447 810 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 POSTNQ15063 836 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 EMBQ6PCB8 327 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 IFIH1Q9BYX4 1025 aaKnown RBP11.47□□□□□ -0.57
LIN54-202ENST00000442461 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 CCDC169A6NNP5 214 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 HMGB1P1B2RPK0 211 aaPredicted RBP11.47□□□□□ -0.57
LIN54-202ENST00000442461 GUCY2DQ02846 1103 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
LIN54-202ENST00000442461 FAM133BQ5BKY9 247 aaKnown RBP11.47□□□□□ -0.57
LIN54-202ENST00000442461 ZNF513Q8N8E2 541 aaPredicted RBP11.47□□□□□ -0.57
LIN54-202ENST00000442461 CTTNBP2NLQ9P2B4 639 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 CTNND2Q9UQB3 1225 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 A0A087WZG4 1122 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 PRC1O43663 620 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 CTNNA2P26232 953 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 PDE6BP35913 854 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 MGARPQ8TDB4 240 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
LIN54-202ENST00000442461 FAM83GA6ND36 823 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 SNUPNO95149 360 aaKnown RBP11.46□□□□□ -0.57
LIN54-202ENST00000442461 CYP2E1P05181 493 aaPredicted RBP11.46□□□□□ -0.57
LIN54-202ENST00000442461 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
LIN54-202ENST00000442461 GGCXP38435 758 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 SCRN1Q12765 414 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 SLC9C1Q4G0N8 1177 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 ZDHHC9Q9Y397 364 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
LIN54-202ENST00000442461 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 ENC1O14682 589 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 H2AFXP16104 143 aaPredicted RBP11.46□□□□□ -0.57
LIN54-202ENST00000442461 RPS6KA1Q15418 735 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 ZBTB10Q96DT7 871 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 CENPKQ9BS16 269 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.57
LIN54-202ENST00000442461 FHOD1Q9Y613 1164 aa11.46□□□□□ -0.57
LIN54-202ENST00000442461 PFKFB1P16118 471 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 SCP2P22307 547 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 NLRP6P59044 892 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 CETN1Q12798 172 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 ANKRD42Q8N9B4 389 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 RNF41Q9H4P4 317 aaPredicted RBP11.46□□□□□ -0.58
LIN54-202ENST00000442461 SBNO1A3KN83 1393 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 BAG2O95816 211 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 ASIC1P78348 528 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 GOLGA8FQ08AF8 430 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 GOLGA8DPQ0D2H9 430 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 PAK1Q13153 545 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.46□□□□□ -0.58
LIN54-202ENST00000442461 VSTM4Q8IW00 320 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 RAB17Q9H0T7 212 aa11.46□□□□□ -0.58
LIN54-202ENST00000442461 CNOT10Q9H9A5 744 aaKnown RBP11.46□□□□□ -0.58
LIN54-202ENST00000442461 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
LIN54-202ENST00000442461 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
LIN54-202ENST00000442461 PNOCQ13519 176 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 RILPL1Q5EBL4 403 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 CFAP157Q5JU67 520 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 PACS2Q86VP3 889 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 ARHGAP18Q8N392 663 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 UBA5Q9GZZ9 404 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 Q9H521 79 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 A0A1W2PQ27 194 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 A0A1W2PQ64 194 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 A0A1W2PQD8 194 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 FAM210AQ96ND0 272 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 CMA1P23946 247 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 IFNAR2P48551 515 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 HHATQ5VTY9 493 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 HVCN1Q96D96 273 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 PCDHA7Q9UN72 937 aa11.45□□□□□ -0.58
LIN54-202ENST00000442461 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
LIN54-202ENST00000442461 FGD4Q96M96 766 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 KIF9Q9HAQ2 790 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
LIN54-202ENST00000442461 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 CFAP61Q8NHU2 1237 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 COG1Q8WTW3 980 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 VIPAS39Q9H9C1 493 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 PDHA1P08559 390 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 PPP1R2P41236 205 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 KCNJ6P48051 423 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 OTUD7BQ6GQQ9 843 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 CDC5LQ99459 802 aaKnown RBP11.44□□□□□ -0.58
LIN54-202ENST00000442461 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 SPATA31E1Q6ZUB1 1445 aa11.44□□□□□ -0.58
LIN54-202ENST00000442461 PI4KAP2A4QPH2 592 aa11.43□□□□□ -0.58
LIN54-202ENST00000442461 NDUFA8P51970 172 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms