RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
TTC28-203ENST00000442232 MYCP01106 439 aaPredicted RBP14.4□□□□□ -0.1
TTC28-203ENST00000442232 CYP2C8P10632 490 aa14.4□□□□□ -0.1
TTC28-203ENST00000442232 GPAT2Q6NUI2 795 aa14.4□□□□□ -0.1
TTC28-203ENST00000442232 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
TTC28-203ENST00000442232 GCC1Q96CN9 775 aa14.4□□□□□ -0.1
TTC28-203ENST00000442232 TRIM47Q96LD4 638 aa14.4□□□□□ -0.1
TTC28-203ENST00000442232 DHX36Q9H2U1 1008 aaKnown RBP14.4□□□□□ -0.1
TTC28-203ENST00000442232 AS3MTQ9HBK9 375 aa14.4□□□□□ -0.1
TTC28-203ENST00000442232 AATFQ9NY61 560 aaKnown RBP eCLIP14.4□□□□□ -0.1
TTC28-203ENST00000442232 BIN2Q9UBW5 565 aaPredicted RBP14.4□□□□□ -0.1
TTC28-203ENST00000442232 NOP58Q9Y2X3 529 aaKnown RBP14.4□□□□□ -0.1
TTC28-203ENST00000442232 FAM196BA6NMK8 535 aa14.39□□□□□ -0.11
TTC28-203ENST00000442232 ZBTB7BO15156 539 aaPredicted RBP14.39□□□□□ -0.11
TTC28-203ENST00000442232 RLBP1P12271 317 aa14.39□□□□□ -0.11
TTC28-203ENST00000442232 EN2P19622 333 aaPredicted RBP14.39□□□□□ -0.11
TTC28-203ENST00000442232 OSBPP22059 807 aa14.39□□□□□ -0.11
TTC28-203ENST00000442232 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.11
TTC28-203ENST00000442232 CRACR2BQ8N4Y2 399 aaPredicted RBP14.39□□□□□ -0.11
TTC28-203ENST00000442232 ZNF512BQ96KM6 892 aaPredicted RBP14.39□□□□□ -0.11
TTC28-203ENST00000442232 AGTPBP1Q9UPW5 1226 aa14.39□□□□□ -0.11
TTC28-203ENST00000442232 MYH1P12882 1939 aa14.39□□□□□ -0.11
TTC28-203ENST00000442232 CYP2E1P05181 493 aaPredicted RBP14.38□□□□□ -0.11
TTC28-203ENST00000442232 HLA-DOAP06340 250 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 BCRP11274 1271 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 GRK4P32298 578 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 ZAP70P43403 619 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 UBXN2AP68543 259 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 HSP90AB4PQ58FF6 505 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 CEP85Q6P2H3 762 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 CERS3Q8IU89 383 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 MAPKAPK5Q8IW41 473 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 PROCA1Q8NCQ7 364 aaPredicted RBP14.38□□□□□ -0.11
TTC28-203ENST00000442232 ZNF280CQ8ND82 737 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 CCDC8Q9H0W5 538 aaPredicted RBP14.38□□□□□ -0.11
TTC28-203ENST00000442232 PI4KBQ9UBF8 816 aa14.38□□□□□ -0.11
TTC28-203ENST00000442232 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
TTC28-203ENST00000442232 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
TTC28-203ENST00000442232 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
TTC28-203ENST00000442232 CAP2P40123 477 aa14.37□□□□□ -0.11
TTC28-203ENST00000442232 CCDC84Q86UT8 332 aaPredicted RBP14.37□□□□□ -0.11
TTC28-203ENST00000442232 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
TTC28-203ENST00000442232 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
TTC28-203ENST00000442232 DBNLQ9UJU6 430 aaKnown RBP14.37□□□□□ -0.11
TTC28-203ENST00000442232 FLT1P17948 1338 aa14.37□□□□□ -0.11
TTC28-203ENST00000442232 SIPA1L1O43166 1804 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
TTC28-203ENST00000442232 CYP7A1P22680 504 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 PPP4CP60510 307 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 PRKCZQ05513 592 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 SPP2Q13103 211 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 AACSQ86V21 672 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 NKX2-3Q8TAU0 364 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 PANK1Q8TE04 598 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
TTC28-203ENST00000442232 TLR7Q9NYK1 1049 aaKnown RBP14.36□□□□□ -0.11
TTC28-203ENST00000442232 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 CENPFP49454 3210 aa14.36□□□□□ -0.11
TTC28-203ENST00000442232 HMMRO75330 724 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 ASNSP08243 561 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 CTGFP29279 349 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 HMGCS2P54868 508 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 MAP3K12Q12852 859 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 TMED8Q6PL24 325 aaPredicted RBP14.35□□□□□ -0.11
TTC28-203ENST00000442232 COA7Q96BR5 231 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 EAF2Q96CJ1 260 aaPredicted RBP14.35□□□□□ -0.11
TTC28-203ENST00000442232 PIH1D3Q9NQM4 214 aaKnown RBP14.35□□□□□ -0.11
TTC28-203ENST00000442232 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
TTC28-203ENST00000442232 USP5P45974 858 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 GCLCP48506 637 aaPredicted RBP14.34□□□□□ -0.11
TTC28-203ENST00000442232 FAM110CQ1W6H9 321 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 TREML2Q5T2D2 321 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 FOXP4Q8IVH2 680 aaPredicted RBP14.34□□□□□ -0.11
TTC28-203ENST00000442232 ANKRD13CQ8N6S4 541 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 SAP30BPQ9UHR5 308 aaKnown RBP14.34□□□□□ -0.11
TTC28-203ENST00000442232 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 DDX19BQ9UMR2 479 aa14.34□□□□□ -0.11
TTC28-203ENST00000442232 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.11
TTC28-203ENST00000442232 ADCY3O60266 1144 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 CCL5P13501 91 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.12
TTC28-203ENST00000442232 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
TTC28-203ENST00000442232 ADGRA1Q86SQ6 560 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 CLASRPQ8N2M8 674 aaKnown RBP14.33□□□□□ -0.12
TTC28-203ENST00000442232 MAGEB6Q8N7X4 407 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 MIGA1Q8NAN2 632 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 RNF208Q9H0X6 261 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 PALD1Q9ULE6 856 aa14.33□□□□□ -0.12
TTC28-203ENST00000442232 APBB1O00213 710 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 GDF11O95390 407 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 DYNLL1P63167 89 aaKnown RBP14.32□□□□□ -0.12
TTC28-203ENST00000442232 MTMR2Q13614 643 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 MTFR1Q15390 333 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 SH3D19Q5HYK7 790 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 WDR18Q9BV38 432 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 GABRQQ9UN88 632 aa14.32□□□□□ -0.12
TTC28-203ENST00000442232 C19orf81C9J6K1 198 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 GJB1P08034 283 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms