RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
SYN3-204ENST00000441821 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
SYN3-204ENST00000441821 DDX4Q9NQI0 724 aaKnown RBP12.47□□□□□ -0.41
SYN3-204ENST00000441821 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 COL6A1P12109 1028 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
SYN3-204ENST00000441821 SPP2Q13103 211 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 ATP2B3Q16720 1220 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 OSBPL5Q9H0X9 879 aaPredicted RBP12.46□□□□□ -0.41
SYN3-204ENST00000441821 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.41
SYN3-204ENST00000441821 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
SYN3-204ENST00000441821 MYH2Q9UKX2 1941 aa12.46□□□□□ -0.42
SYN3-204ENST00000441821 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
SYN3-204ENST00000441821 CIAO1O76071 339 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
SYN3-204ENST00000441821 CYP2B6P20813 491 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 PHKA1P46020 1223 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 HMGCS2P54868 508 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 PICALMQ13492 652 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 DZIP1Q86YF9 867 aaKnown RBP12.45□□□□□ -0.42
SYN3-204ENST00000441821 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
SYN3-204ENST00000441821 GUCD1Q96NT3 240 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 PLXNB2O15031 1838 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 CDH23Q9H251 3354 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 COL2A1P02458 1487 aaPredicted RBP12.45□□□□□ -0.42
SYN3-204ENST00000441821 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
SYN3-204ENST00000441821 PTPRCP08575 1304 aa12.44□□□□□ -0.42
SYN3-204ENST00000441821 PDS5AQ29RF7 1337 aaKnown RBP12.44□□□□□ -0.42
SYN3-204ENST00000441821 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
SYN3-204ENST00000441821 BTDP43251 543 aa12.44□□□□□ -0.42
SYN3-204ENST00000441821 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
SYN3-204ENST00000441821 LRRC26Q2I0M4 334 aa12.44□□□□□ -0.42
SYN3-204ENST00000441821 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
SYN3-204ENST00000441821 SOCS4Q8WXH5 440 aa12.44□□□□□ -0.42
SYN3-204ENST00000441821 NUDT12Q9BQG2 462 aa12.44□□□□□ -0.42
SYN3-204ENST00000441821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYN3-204ENST00000441821 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 CAP2P40123 477 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 RHBDL3P58872 404 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
SYN3-204ENST00000441821 SPTY2D1Q68D10 685 aaPredicted RBP12.43□□□□□ -0.42
SYN3-204ENST00000441821 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 LHX8Q68G74 356 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 ABCF2Q9UG63 623 aa12.43□□□□□ -0.42
SYN3-204ENST00000441821 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
SYN3-204ENST00000441821 MAP4K4O95819 1239 aaPredicted RBP12.42□□□□□ -0.42
SYN3-204ENST00000441821 ZKSCAN1P17029 563 aaPredicted RBP12.42□□□□□ -0.42
SYN3-204ENST00000441821 HOXA7P31268 230 aaPredicted RBP12.42□□□□□ -0.42
SYN3-204ENST00000441821 IL15P40933 162 aaPredicted RBP12.42□□□□□ -0.42
SYN3-204ENST00000441821 GPRC5AQ8NFJ5 357 aa12.42□□□□□ -0.42
SYN3-204ENST00000441821 USP6NLQ92738 828 aa12.42□□□□□ -0.42
SYN3-204ENST00000441821 SIL1Q9H173 461 aa12.42□□□□□ -0.42
SYN3-204ENST00000441821 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
SYN3-204ENST00000441821 MAPK4P31152 587 aa12.41□□□□□ -0.42
SYN3-204ENST00000441821 IRX3P78415 501 aaPredicted RBP12.41□□□□□ -0.42
SYN3-204ENST00000441821 RASGRF1Q13972 1273 aa12.41□□□□□ -0.42
SYN3-204ENST00000441821 PDE3AQ14432 1141 aa12.41□□□□□ -0.42
SYN3-204ENST00000441821 RRP1BQ14684 758 aaKnown RBP12.41□□□□□ -0.42
SYN3-204ENST00000441821 FAM161BQ96MY7 647 aa12.41□□□□□ -0.42
SYN3-204ENST00000441821 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
SYN3-204ENST00000441821 LBHD1Q9BQE6 289 aaPredicted RBP12.41□□□□□ -0.42
SYN3-204ENST00000441821 WDR18Q9BV38 432 aa12.41□□□□□ -0.42
SYN3-204ENST00000441821 ATAD5Q96QE3 1844 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
SYN3-204ENST00000441821 ADORA1P30542 326 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 RGS2P41220 211 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 BACE1P56817 501 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 HERVK_113P62684 666 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 MECOMQ03112 1051 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 ZNF697Q5TEC3 545 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 ERICH6Q7L0X2 663 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 MRS2Q9HD23 443 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 TXNRD2Q9NNW7 524 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
SYN3-204ENST00000441821 HERC5Q9UII4 1024 aaKnown RBP12.4□□□□□ -0.42
SYN3-204ENST00000441821 MTMR2Q13614 643 aa12.39□□□□□ -0.43
SYN3-204ENST00000441821 MORN1Q5T089 497 aa12.39□□□□□ -0.43
SYN3-204ENST00000441821 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
SYN3-204ENST00000441821 TMOD4Q9NZQ9 345 aa12.39□□□□□ -0.43
SYN3-204ENST00000441821 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
SYN3-204ENST00000441821 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 PEX10O60683 326 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 LDHCP07864 332 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 ASNSP08243 561 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 TIMM10P62072 90 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 ERVK-9P63128 1117 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 ERVK-24P63145 666 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 GSTO1P78417 241 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 CCL14Q16627 93 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 Q3C1V9 767 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 GPR142Q7Z601 462 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 PLEKHH3Q7Z736 793 aa12.38□□□□□ -0.43
SYN3-204ENST00000441821 CCAR1Q8IX12 1150 aaKnown RBP12.38□□□□□ -0.43
SYN3-204ENST00000441821 GTF3C2Q8WUA4 911 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms