RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ICE2Q659A1 982 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 MB21D2Q8IYB1 491 aaPredicted RBP23.13■■□□□ 1.29
SHOX2-203ENST00000441443 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 FBXL16Q8N461 479 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 PCDH11XQ9BZA7 1347 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 PCDH11YQ9BZA8 1340 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 AKR1B15C9JRZ8 316 aaPredicted RBP23.12■■□□□ 1.29
SHOX2-203ENST00000441443 TTC31Q49AM3 519 aaPredicted RBP23.12■■□□□ 1.29
SHOX2-203ENST00000441443 RALYLQ86SE5 291 aaKnown RBP23.12■■□□□ 1.29
SHOX2-203ENST00000441443 MSANTD4Q8NCY6 345 aa23.12■■□□□ 1.29
SHOX2-203ENST00000441443 MED15Q96RN5 788 aa23.12■■□□□ 1.29
SHOX2-203ENST00000441443 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
SHOX2-203ENST00000441443 UBE2Q2LH0YL09 131 aa23.12■■□□□ 1.29
SHOX2-203ENST00000441443 IL2RBP14784 551 aa23.12■■□□□ 1.29
SHOX2-203ENST00000441443 MAGEA9P43362 315 aa23.12■■□□□ 1.29
SHOX2-203ENST00000441443 HSP90B2PQ58FF3 399 aa23.12■■□□□ 1.29
SHOX2-203ENST00000441443 ABL1P00519 1130 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 LRRC24Q50LG9 513 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 LRRC31Q6UY01 552 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 ATG9AQ7Z3C6 839 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 MDM2Q00987 491 aaPredicted RBP23.11■■□□□ 1.29
SHOX2-203ENST00000441443 RGS22Q8NE09 1264 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 CDC5LQ99459 802 aaKnown RBP23.11■■□□□ 1.29
SHOX2-203ENST00000441443 TOMM22Q9NS69 142 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 GRIN1Q05586 938 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 RBL2Q08999 1139 aa23.11■■□□□ 1.29
SHOX2-203ENST00000441443 STRCP1A6NGW2 1772 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
SHOX2-203ENST00000441443 SLC35F6Q8N357 371 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 NR1I3Q14994 352 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 POSTNQ15063 836 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 TTC39AQ5SRH9 613 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 NCOA7Q8NI08 942 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 NKX2-3Q8TAU0 364 aa23.1■■□□□ 1.29
SHOX2-203ENST00000441443 LRRIQ3A6PVS8 624 aaPredicted RBP23.09■■□□□ 1.29
SHOX2-203ENST00000441443 CTR9Q6PD62 1173 aa23.09■■□□□ 1.29
SHOX2-203ENST00000441443 PUS3Q9BZE2 481 aaKnown RBP23.09■■□□□ 1.29
SHOX2-203ENST00000441443 FAM204AQ9H8W3 233 aa23.09■■□□□ 1.29
SHOX2-203ENST00000441443 JRKLQ9Y4A0 524 aa23.09■■□□□ 1.29
SHOX2-203ENST00000441443 FAM237AA0A1B0GTK4 181 aa23.09■■□□□ 1.29
SHOX2-203ENST00000441443 POTEB2H3BUK9 544 aa23.09■■□□□ 1.29
SHOX2-203ENST00000441443 SLC9C2Q5TAH2 1124 aa23.09■■□□□ 1.29
SHOX2-203ENST00000441443 CTAGE9A4FU28 777 aa23.08■■□□□ 1.29
SHOX2-203ENST00000441443 POLR2DO15514 142 aaKnown RBP23.08■■□□□ 1.29
SHOX2-203ENST00000441443 NUTM2AQ8IVF1 878 aaPredicted RBP23.08■■□□□ 1.29
SHOX2-203ENST00000441443 ENOX1Q8TC92 643 aaKnown RBP23.08■■□□□ 1.29
SHOX2-203ENST00000441443 SERTAD1Q9UHV2 236 aa23.08■■□□□ 1.29
SHOX2-203ENST00000441443 IGSF22Q8N9C0 903 aa23.08■■□□□ 1.29
SHOX2-203ENST00000441443 NOA1Q8NC60 698 aaKnown RBP23.08■■□□□ 1.29
SHOX2-203ENST00000441443 RNF216Q9NWF9 866 aaPredicted RBP23.08■■□□□ 1.29
SHOX2-203ENST00000441443 RPS6KA5O75582 802 aa23.08■■□□□ 1.28
SHOX2-203ENST00000441443 METAP2P50579 478 aaKnown RBP eCLIP23.08■■□□□ 1.28
SHOX2-203ENST00000441443 FOXO4P98177 505 aa23.08■■□□□ 1.28
SHOX2-203ENST00000441443 PPFIBP1Q86W92 1011 aa23.08■■□□□ 1.28
SHOX2-203ENST00000441443 ACRBPQ8NEB7 543 aa23.08■■□□□ 1.28
SHOX2-203ENST00000441443 MICU3Q86XE3 530 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 SENP2Q9HC62 589 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 ASAP1Q9ULH1 1129 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 CAMTA1Q9Y6Y1 1673 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 CASP7P55210 303 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 KLHL10Q6JEL2 608 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 FAM71BQ8TC56 605 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 DRC1Q96MC2 740 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 PANX2Q96RD6 677 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 TMOD3Q9NYL9 352 aa23.07■■□□□ 1.28
SHOX2-203ENST00000441443 GPTP24298 496 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 STX17P56962 302 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 KRI1Q8N9T8 703 aaKnown RBP23.06■■□□□ 1.28
SHOX2-203ENST00000441443 MLKLQ8NB16 471 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 CTAGE15A4D2H0 777 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 ZNF213O14771 459 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 CTAGE8P0CG41 777 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 CTAGE6Q86UF2 777 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 CTAGE4Q8IX94 777 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 PUS7LQ9H0K6 701 aaKnown RBP23.06■■□□□ 1.28
SHOX2-203ENST00000441443 MYL10Q9BUA6 226 aa23.06■■□□□ 1.28
SHOX2-203ENST00000441443 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.06■■□□□ 1.28
SHOX2-203ENST00000441443 A0A1B0GTH6 734 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 SYNE4Q8N205 404 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 MKRN1Q9UHC7 482 aaKnown RBP23.05■■□□□ 1.28
SHOX2-203ENST00000441443 HOOK1Q9UJC3 728 aaKnown RBP23.05■■□□□ 1.28
SHOX2-203ENST00000441443 H7C1W4 665 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 CORO7P57737 925 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 TRDNQ13061 729 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 MORC3Q14149 939 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 NCAPH2Q6IBW4 605 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 DNAJC10Q8IXB1 793 aa23.05■■□□□ 1.28
SHOX2-203ENST00000441443 CASP14P31944 242 aa23.04■■□□□ 1.28
SHOX2-203ENST00000441443 ZMYM6O95789 1325 aa23.04■■□□□ 1.28
SHOX2-203ENST00000441443 CPDO75976 1380 aa23.04■■□□□ 1.28
SHOX2-203ENST00000441443 TAF7LQ5H9L4 462 aa23.04■■□□□ 1.28
SHOX2-203ENST00000441443 DCCP43146 1447 aa23.04■■□□□ 1.28
SHOX2-203ENST00000441443 ERVV-2B6SEH9 535 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 RNF40O75150 1001 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 TRIM29Q14134 588 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 DACH1Q9UI36 760 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms