RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 CDC27P30260 824 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 DNTTIP2Q5QJE6 756 aaKnown RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 CCDC183Q5T5S1 534 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 STYK1Q6J9G0 422 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 NBPF11Q86T75 865 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 FBXO18Q8NFZ0 1043 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 GDPD2Q9HCC8 539 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 CGNQ9P2M7 1197 aaKnown RBP15.36■□□□□ 0.05
ACTN4-204ENST00000440400 RCOR1Q9UKL0 485 aa15.36■□□□□ 0.05
ACTN4-204ENST00000440400 MYH6P13533 1939 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 ZNF500O60304 480 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-204ENST00000440400 UFL1O94874 794 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 LDHBP07195 334 aaKnown RBP15.35■□□□□ 0.05
ACTN4-204ENST00000440400 METAP2P50579 478 aaKnown RBP eCLIP15.35■□□□□ 0.051e-6■■□□□ 14.3
ACTN4-204ENST00000440400 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 ANKS1AQ92625 1134 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 SLX4Q8IY92 1834 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 GPR75-ASB3A0A0A6YYF3 556 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 NPHP1O15259 732 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-204ENST00000440400 IFNAR1P17181 557 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
ACTN4-204ENST00000440400 ESR2Q92731 530 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 FUCA2Q9BTY2 467 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 ADAMTSL1Q8N6G6 1762 aa15.35■□□□□ 0.05
ACTN4-204ENST00000440400 ZBTB43O43298 467 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 RANBP6O60518 1105 aaKnown RBP15.34■□□□□ 0.05
ACTN4-204ENST00000440400 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 DDX11Q96FC9 970 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 MASTLQ96GX5 879 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 DTNBO60941 627 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 POTEAQ6S8J7 498 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 COA1Q9GZY4 146 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 GRIK5Q16478 980 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 CFAP45Q9UL16 551 aa15.34■□□□□ 0.05
ACTN4-204ENST00000440400 FKBP1AP62942 108 aaKnown RBP15.33■□□□□ 0.04
ACTN4-204ENST00000440400 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
ACTN4-204ENST00000440400 RBSNQ9H1K0 784 aa15.33■□□□□ 0.04
ACTN4-204ENST00000440400 H3BQV1 296 aa15.33■□□□□ 0.04
ACTN4-204ENST00000440400 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
ACTN4-204ENST00000440400 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
ACTN4-204ENST00000440400 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
ACTN4-204ENST00000440400 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
ACTN4-204ENST00000440400 TCP11L1Q9NUJ3 509 aa15.33■□□□□ 0.04
ACTN4-204ENST00000440400 MORC2Q9Y6X9 1032 aaPredicted RBP15.33■□□□□ 0.04
ACTN4-204ENST00000440400 SIPA1L1O43166 1804 aa15.33■□□□□ 0.04
ACTN4-204ENST00000440400 FIBPO43427 364 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 LDHCP07864 332 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 WTAPQ15007 396 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 ZSCAN10Q96SZ4 725 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-204ENST00000440400 AATFQ9NY61 560 aaKnown RBP eCLIP15.32■□□□□ 0.04
ACTN4-204ENST00000440400 RTEL1Q9NZ71 1219 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-204ENST00000440400 FUT2Q10981 343 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
ACTN4-204ENST00000440400 MAP3K14Q99558 947 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 ZKSCAN5Q9Y2L8 839 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 DDAH1O94760 285 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 MMP10P09238 476 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 NOVP48745 357 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-204ENST00000440400 FERMT3Q86UX7 667 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 ENAHQ8N8S7 591 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-204ENST00000440400 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 SLC12A7Q9Y666 1083 aa15.32■□□□□ 0.04
ACTN4-204ENST00000440400 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 KIF20AO95235 890 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 U2AF2P26368 475 aaKnown RBP eCLIP15.31■□□□□ 0.04
ACTN4-204ENST00000440400 KIF23Q02241 960 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-204ENST00000440400 SLC15A2Q16348 729 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 ZNF710Q8N1W2 664 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 PLIN4Q96Q06 1357 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 CCDC69A6NI79 296 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 ZNF396Q96N95 335 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-204ENST00000440400 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 TNKSO95271 1327 aa15.31■□□□□ 0.04
ACTN4-204ENST00000440400 USP17L12C9JPN9 530 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 USP17L21D6R901 530 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 RHBDL3P58872 404 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 ZNF654Q8IZM8 581 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 C8orf76Q96K31 380 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 SPATA32Q96LK8 384 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 GTPBP4Q9BZE4 634 aaKnown RBP15.3■□□□□ 0.04
ACTN4-204ENST00000440400 FAM173BQ6P4H8 233 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 SH3RF3Q8TEJ3 882 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-204ENST00000440400 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-204ENST00000440400 BAG3O95817 575 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
ACTN4-204ENST00000440400 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CCDC196A0A1B0GTZ2 297 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CALM1P0DP23 149 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CALM2P0DP24 149 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CALM3P0DP25 149 aa15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CDK11BP21127 795 aaKnown RBP15.29■□□□□ 0.04
ACTN4-204ENST00000440400 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
ACTN4-204ENST00000440400 SLF2Q8IX21 1173 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms