RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 RPTORQ8N122 1335 aa17.05■□□□□ 0.32
SMC2-204ENST00000440179 ENTPD3O75355 529 aa17.05■□□□□ 0.32
SMC2-204ENST00000440179 DDTLA6NHG4 134 aaPredicted RBP17.04■□□□□ 0.32
SMC2-204ENST00000440179 CTNND1O60716 968 aaKnown RBP17.04■□□□□ 0.32
SMC2-204ENST00000440179 LPIN2Q92539 896 aa17.04■□□□□ 0.32
SMC2-204ENST00000440179 GUCD1Q96NT3 240 aa17.04■□□□□ 0.32
SMC2-204ENST00000440179 HMX1Q9NP08 348 aaPredicted RBP17.04■□□□□ 0.32
SMC2-204ENST00000440179 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
SMC2-204ENST00000440179 PLXNB2O15031 1838 aa17.04■□□□□ 0.32
SMC2-204ENST00000440179 GAKO14976 1311 aa17.03■□□□□ 0.32
SMC2-204ENST00000440179 SALL1Q9NSC2 1324 aa17.03■□□□□ 0.32
SMC2-204ENST00000440179 LDHBP07195 334 aaKnown RBP17.03■□□□□ 0.32
SMC2-204ENST00000440179 SLC5A1P13866 664 aa17.03■□□□□ 0.32
SMC2-204ENST00000440179 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
SMC2-204ENST00000440179 MAP3K21Q5TCX8 1036 aa17.03■□□□□ 0.32
SMC2-204ENST00000440179 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
SMC2-204ENST00000440179 TRIB2Q92519 343 aa17.03■□□□□ 0.32
SMC2-204ENST00000440179 DDX4Q9NQI0 724 aaKnown RBP17.03■□□□□ 0.32
SMC2-204ENST00000440179 COL2A1P02458 1487 aaPredicted RBP17.03■□□□□ 0.32
SMC2-204ENST00000440179 LOC285556D6RIA3 1793 aa17.02■□□□□ 0.32
SMC2-204ENST00000440179 POTEB2H3BUK9 544 aa17.02■□□□□ 0.32
SMC2-204ENST00000440179 COL6A1P12109 1028 aa17.02■□□□□ 0.32
SMC2-204ENST00000440179 RFX5P48382 616 aaPredicted RBP17.02■□□□□ 0.32
SMC2-204ENST00000440179 EYA2O00167 538 aa17.01■□□□□ 0.31
SMC2-204ENST00000440179 GCLCP48506 637 aaPredicted RBP17.01■□□□□ 0.31
SMC2-204ENST00000440179 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
SMC2-204ENST00000440179 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
SMC2-204ENST00000440179 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
SMC2-204ENST00000440179 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
SMC2-204ENST00000440179 MYH2Q9UKX2 1941 aa17.01■□□□□ 0.31
SMC2-204ENST00000440179 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
SMC2-204ENST00000440179 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
SMC2-204ENST00000440179 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
SMC2-204ENST00000440179 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
SMC2-204ENST00000440179 LRRC26Q2I0M4 334 aa16.99■□□□□ 0.31
SMC2-204ENST00000440179 SP7Q8TDD2 431 aaPredicted RBP16.99■□□□□ 0.31
SMC2-204ENST00000440179 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
SMC2-204ENST00000440179 FAM196BA6NMK8 535 aa16.98■□□□□ 0.31
SMC2-204ENST00000440179 PHKA1P46020 1223 aa16.98■□□□□ 0.31
SMC2-204ENST00000440179 HMGCS2P54868 508 aa16.98■□□□□ 0.31
SMC2-204ENST00000440179 SPP2Q13103 211 aa16.98■□□□□ 0.31
SMC2-204ENST00000440179 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
SMC2-204ENST00000440179 MORF4L1Q9UBU8 362 aa16.98■□□□□ 0.31
SMC2-204ENST00000440179 TBC1D12O60347 775 aa16.97■□□□□ 0.31
SMC2-204ENST00000440179 CYP2B6P20813 491 aa16.97■□□□□ 0.31
SMC2-204ENST00000440179 PICALMQ13492 652 aa16.97■□□□□ 0.31
SMC2-204ENST00000440179 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
SMC2-204ENST00000440179 ATP2B3Q16720 1220 aa16.97■□□□□ 0.31
SMC2-204ENST00000440179 FAM161BQ96MY7 647 aa16.97■□□□□ 0.31
SMC2-204ENST00000440179 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
SMC2-204ENST00000440179 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
SMC2-204ENST00000440179 SEMA3EO15041 775 aa16.96■□□□□ 0.31
SMC2-204ENST00000440179 PEX10O60683 326 aa16.96■□□□□ 0.31
SMC2-204ENST00000440179 RHBDL3P58872 404 aa16.96■□□□□ 0.31
SMC2-204ENST00000440179 LHX8Q68G74 356 aa16.96■□□□□ 0.31
SMC2-204ENST00000440179 ZNF280CQ8ND82 737 aa16.96■□□□□ 0.31
SMC2-204ENST00000440179 FAM163AQ96GL9 167 aaPredicted RBP16.96■□□□□ 0.31
SMC2-204ENST00000440179 GNL3LQ9NVN8 582 aaKnown RBP16.96■□□□□ 0.31
SMC2-204ENST00000440179 XRCC5P13010 732 aaKnown RBP16.95■□□□□ 0.3
SMC2-204ENST00000440179 BTDP43251 543 aa16.95■□□□□ 0.3
SMC2-204ENST00000440179 CACNB2Q08289 660 aaPredicted RBP16.95■□□□□ 0.3
SMC2-204ENST00000440179 CCND3P30281 292 aaPredicted RBP16.94■□□□□ 0.3
SMC2-204ENST00000440179 EVX2Q03828 476 aa16.94■□□□□ 0.3
SMC2-204ENST00000440179 PABPC4Q13310 644 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMC2-204ENST00000440179 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
SMC2-204ENST00000440179 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
SMC2-204ENST00000440179 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
SMC2-204ENST00000440179 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
SMC2-204ENST00000440179 SIL1Q9H173 461 aa16.94■□□□□ 0.3
SMC2-204ENST00000440179 TXNRD2Q9NNW7 524 aa16.94■□□□□ 0.3
SMC2-204ENST00000440179 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
SMC2-204ENST00000440179 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 ADORA1P30542 326 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 RASGRF1Q13972 1273 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
SMC2-204ENST00000440179 SOCS4Q8WXH5 440 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 USP6NLQ92738 828 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 NUDT12Q9BQG2 462 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMC2-204ENST00000440179 PRDM6Q9NQX0 595 aa16.93■□□□□ 0.3
SMC2-204ENST00000440179 MAST2Q6P0Q8 1798 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 CIAO1O76071 339 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 CAP2P40123 477 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 CCL14Q16627 93 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 MRPL50Q8N5N7 158 aaKnown RBP16.92■□□□□ 0.3
SMC2-204ENST00000440179 P2RX7Q99572 595 aaKnown RBP16.92■□□□□ 0.3
SMC2-204ENST00000440179 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 CEP126Q9P2H0 1117 aa16.92■□□□□ 0.3
SMC2-204ENST00000440179 GPR75-ASB3A0A0A6YYF3 556 aa16.91■□□□□ 0.3
SMC2-204ENST00000440179 USP17L5A8MUK1 530 aa16.91■□□□□ 0.3
SMC2-204ENST00000440179 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
SMC2-204ENST00000440179 ZNF697Q5TEC3 545 aa16.91■□□□□ 0.3
SMC2-204ENST00000440179 CDX2Q99626 313 aaPredicted RBP16.91■□□□□ 0.3
SMC2-204ENST00000440179 ABCF2Q9UG63 623 aa16.91■□□□□ 0.3
SMC2-204ENST00000440179 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
SMC2-204ENST00000440179 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
SMC2-204ENST00000440179 FRMPD3Q5JV73 1810 aa16.91■□□□□ 0.3
SMC2-204ENST00000440179 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
SMC2-204ENST00000440179 HERVK_113P62684 666 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms