RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DHX36Q9H2U1 1008 aaKnown RBP24.16■■□□□ 1.46
SHROOM1-204ENST00000440118 TBC1D12O60347 775 aa24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 PPP4CP60510 307 aa24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 MAP3K10Q02779 954 aa24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 CERS3Q8IU89 383 aa24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 MIGA1Q8NAN2 632 aa24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 PARK7Q99497 189 aaKnown RBP24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 DNAJC2Q99543 621 aaKnown RBP24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 PI4KBQ9UBF8 816 aa24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 HERC5Q9UII4 1024 aaKnown RBP24.15■■□□□ 1.46
SHROOM1-204ENST00000440118 SIPA1L1O43166 1804 aa24.14■■□□□ 1.46
SHROOM1-204ENST00000440118 TRIM75PA6NK02 468 aa24.14■■□□□ 1.45
SHROOM1-204ENST00000440118 USP5P45974 858 aa24.14■■□□□ 1.45
SHROOM1-204ENST00000440118 FASTKD5Q7L8L6 764 aaKnown RBP24.14■■□□□ 1.45
SHROOM1-204ENST00000440118 ANTXR1Q9H6X2 564 aa24.14■■□□□ 1.45
SHROOM1-204ENST00000440118 ZSWIM8A7E2V4 1837 aa24.13■■□□□ 1.45
SHROOM1-204ENST00000440118 HLA-DOAP06340 250 aa24.13■■□□□ 1.45
SHROOM1-204ENST00000440118 DYNLL1P63167 89 aaKnown RBP24.13■■□□□ 1.45
SHROOM1-204ENST00000440118 SAP30BPQ9UHR5 308 aaKnown RBP24.13■■□□□ 1.45
SHROOM1-204ENST00000440118 PTPN22Q9Y2R2 807 aa24.13■■□□□ 1.45
SHROOM1-204ENST00000440118 NAV1Q8NEY1 1877 aa24.13■■□□□ 1.45
SHROOM1-204ENST00000440118 A0A0G2JLL6 359 aaPredicted RBP24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 ECM2O94769 699 aaPredicted RBP24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 RGS19P49795 217 aa24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 TMED8Q6PL24 325 aaPredicted RBP24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 PRRT2Q7Z6L0 340 aaPredicted RBP24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 YTHDC1Q96MU7 727 aaKnown RBP24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 CPA4Q9UI42 421 aa24.12■■□□□ 1.45
SHROOM1-204ENST00000440118 GOLIM4O00461 696 aa24.11■■□□□ 1.45
SHROOM1-204ENST00000440118 SLC4A8Q2Y0W8 1093 aa24.11■■□□□ 1.45
SHROOM1-204ENST00000440118 CCDC84Q86UT8 332 aaPredicted RBP24.11■■□□□ 1.45
SHROOM1-204ENST00000440118 PALD1Q9ULE6 856 aa24.11■■□□□ 1.45
SHROOM1-204ENST00000440118 AFG3L2Q9Y4W6 797 aa24.11■■□□□ 1.45
SHROOM1-204ENST00000440118 MYH7P12883 1935 aa24.1■■□□□ 1.45
SHROOM1-204ENST00000440118 LACTBP83111 547 aaPredicted RBP24.1■■□□□ 1.45
SHROOM1-204ENST00000440118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.1■■□□□ 1.45
SHROOM1-204ENST00000440118 LRRCC1Q9C099 1032 aa24.1■■□□□ 1.45
SHROOM1-204ENST00000440118 CAP2P40123 477 aa24.09■■□□□ 1.45
SHROOM1-204ENST00000440118 AS3MTQ9HBK9 375 aa24.09■■□□□ 1.45
SHROOM1-204ENST00000440118 CYP2C8P10632 490 aa24.08■■□□□ 1.45
SHROOM1-204ENST00000440118 MOGSQ13724 837 aa24.08■■□□□ 1.45
SHROOM1-204ENST00000440118 SLC9C2Q5TAH2 1124 aa24.08■■□□□ 1.45
SHROOM1-204ENST00000440118 SMCR8Q8TEV9 937 aaPredicted RBP24.08■■□□□ 1.45
SHROOM1-204ENST00000440118 TBC1D2Q9BYX2 928 aa24.08■■□□□ 1.45
SHROOM1-204ENST00000440118 LOC285556D6RIA3 1793 aa24.08■■□□□ 1.44
SHROOM1-204ENST00000440118 MGAMO43451 1857 aa24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 MAGEB6P1A0A0J9YX57 407 aa24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 USP17L5A8MUK1 530 aa24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 SPP2Q13103 211 aa24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 FOXP4Q8IVH2 680 aaPredicted RBP24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 ZNF280CQ8ND82 737 aa24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 ARHGAP39Q9C0H5 1083 aa24.07■■□□□ 1.44
SHROOM1-204ENST00000440118 ASNSP08243 561 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 PDE6AP16499 860 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 SLC9C1Q4G0N8 1177 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 GPAT2Q6NUI2 795 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 C17orf99Q6UX52 265 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 BOLA2Q9H3K6 86 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 PAG1Q9NWQ8 432 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 PNMA3Q9UL41 463 aa24.06■■□□□ 1.44
SHROOM1-204ENST00000440118 FMNL1O95466 1100 aaPredicted RBP24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 GNRH1P01148 92 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 CAP1Q01518 475 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 CRNKL1Q9BZJ0 848 aaKnown RBP24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 AGTPBP1Q9UPW5 1226 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 SLC45A1Q9Y2W3 748 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 PTCH2Q9Y6C5 1203 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 HTTP42858 3142 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 TNRC18O15417 2968 aaPredicted RBP24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 ZNF532Q9HCE3 1301 aa24.05■■□□□ 1.44
SHROOM1-204ENST00000440118 PDE4DIPQ5VU43 2346 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 SMARCA5O60264 1052 aaPredicted RBP24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 GDF11O95390 407 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 PSMC4P43686 418 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 NBPF11Q86T75 865 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 GPATCH3Q96I76 525 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 ADGRA2Q96PE1 1338 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 MYH8P13535 1937 aa24.04■■□□□ 1.44
SHROOM1-204ENST00000440118 ATP5JP18859 108 aa24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 HOXD10P28358 340 aa24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 HMGCS2P54868 508 aa24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 RRP1P56182 461 aaKnown RBP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 PABPC4Q13310 644 aaKnown RBP eCLIP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 TTC6Q86TZ1 520 aa24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 PROCA1Q8NCQ7 364 aaPredicted RBP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 EDC3Q96F86 508 aaKnown RBP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 DDX60LQ5H9U9 1706 aaKnown RBP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 RBBP6Q7Z6E9 1792 aaKnown RBP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 KIAA0100Q14667 2235 aaKnown RBP24.03■■□□□ 1.44
SHROOM1-204ENST00000440118 POLR3DP05423 398 aaPredicted RBP24.02■■□□□ 1.44
SHROOM1-204ENST00000440118 RRP1BQ14684 758 aaKnown RBP24.02■■□□□ 1.44
SHROOM1-204ENST00000440118 DNAJC18Q9H819 358 aa24.02■■□□□ 1.44
SHROOM1-204ENST00000440118 TMOD4Q9NZQ9 345 aa24.02■■□□□ 1.44
SHROOM1-204ENST00000440118 SERPINB13Q9UIV8 391 aa24.02■■□□□ 1.44
SHROOM1-204ENST00000440118 PRMT2P55345 433 aa24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 FCGRTP55899 365 aa24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 MTMR2Q13614 643 aa24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 TREML2Q5T2D2 321 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms