RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 NEFLP07196 543 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 HSPA1AP0DMV8 641 aaKnown RBP12.61□□□□□ -0.39
UBE2F-213ENST00000439780 HSPA1BP0DMV9 641 aaKnown RBP12.61□□□□□ -0.39
UBE2F-213ENST00000439780 CYP2D6P10635 497 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 PLCD1P51178 756 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 JAG1P78504 1218 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
UBE2F-213ENST00000439780 AIDAQ96BJ3 306 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBE2F-213ENST00000439780 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
UBE2F-213ENST00000439780 CSADQ9Y600 493 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
UBE2F-213ENST00000439780 MYH1P12882 1939 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 DDX60LQ5H9U9 1706 aaKnown RBP12.6□□□□□ -0.39
UBE2F-213ENST00000439780 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 SPDYE5A6NIY4 337 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 GSG1L2A8MUP6 293 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 GPAA1O43292 621 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
UBE2F-213ENST00000439780 SHROOM1Q2M3G4 852 aaPredicted RBP12.6□□□□□ -0.39
UBE2F-213ENST00000439780 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
UBE2F-213ENST00000439780 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 CCDC129Q6ZRS4 1044 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 FOXP4Q8IVH2 680 aaPredicted RBP12.6□□□□□ -0.39
UBE2F-213ENST00000439780 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 FAM227BQ96M60 508 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 ATP8A2Q9NTI2 1148 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
UBE2F-213ENST00000439780 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 FOXN1O15353 648 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 FOXP2O15409 715 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
UBE2F-213ENST00000439780 ZBTB48P10074 688 aaPredicted RBP12.59□□□□□ -0.39
UBE2F-213ENST00000439780 MAP2K1Q02750 393 aaPredicted RBP12.59□□□□□ -0.39
UBE2F-213ENST00000439780 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
UBE2F-213ENST00000439780 ERO1BQ86YB8 467 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 CCDC136Q96JN2 1154 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 HERC5Q9UII4 1024 aaKnown RBP12.59□□□□□ -0.39
UBE2F-213ENST00000439780 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
UBE2F-213ENST00000439780 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 USP17L21D6R901 530 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 IRF6O14896 467 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 POLR3DP05423 398 aaPredicted RBP12.58□□□□□ -0.4
UBE2F-213ENST00000439780 HLA-DOAP06340 250 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 PTPRAP18433 802 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 SDSP20132 328 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 CAP2P40123 477 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 TM4SF4P48230 202 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 GABPAQ06546 454 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 NMIQ13287 307 aaPredicted RBP12.58□□□□□ -0.4
UBE2F-213ENST00000439780 LRRFIP1Q32MZ4 808 aaKnown RBP12.58□□□□□ -0.4
UBE2F-213ENST00000439780 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 CRACR2BQ8N4Y2 399 aaPredicted RBP12.58□□□□□ -0.4
UBE2F-213ENST00000439780 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 PTPN18Q99952 460 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 EHD4Q9H223 541 aa12.58□□□□□ -0.4
UBE2F-213ENST00000439780 EPB41L4AQ9HCS5 686 aaPredicted RBP12.58□□□□□ -0.4
UBE2F-213ENST00000439780 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
UBE2F-213ENST00000439780 SHMT1P34896 483 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 PPATQ06203 517 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 PPIL2Q13356 520 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 C12orf60Q5U649 245 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 TATDN1Q6P1N9 297 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 RNF186Q9NXI6 227 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 SERPINB13Q9UIV8 391 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
UBE2F-213ENST00000439780 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
UBE2F-213ENST00000439780 MANSC4A6NHS7 340 aaPredicted RBP12.56□□□□□ -0.4
UBE2F-213ENST00000439780 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
UBE2F-213ENST00000439780 IGF2BP3O00425 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
UBE2F-213ENST00000439780 GDF11O95390 407 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
UBE2F-213ENST00000439780 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 SLC44A5Q8NCS7 719 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 BRI3BPQ8WY22 251 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 ZHX2Q9Y6X8 837 aa12.56□□□□□ -0.4
UBE2F-213ENST00000439780 DOCK1Q14185 1865 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 TRPA1O75762 1119 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 HSPA8P11142 646 aaKnown RBP12.55□□□□□ -0.4
UBE2F-213ENST00000439780 GNAT2P19087 354 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 MOGSQ13724 837 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 MCMDC2Q4G0Z9 681 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
UBE2F-213ENST00000439780 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 R3HDMLQ9H3Y0 253 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 KCNH4Q9UQ05 1017 aa12.55□□□□□ -0.4
UBE2F-213ENST00000439780 AFG3L2Q9Y4W6 797 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms