RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-213	ENST00000439732	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.42	□□□□□ -0.58
SMARCA2-213	ENST00000439732	PICK1	Q9NRD5	415 aa		11.42	□□□□□ -0.58
SMARCA2-213	ENST00000439732	DIAPH3	Q9NSV4	1193 aa		11.42	□□□□□ -0.58
SMARCA2-213	ENST00000439732	FZD1	Q9UP38	647 aa		11.42	□□□□□ -0.58
SMARCA2-213	ENST00000439732	FOCAD	Q5VW36	1801 aa		11.42	□□□□□ -0.58
SMARCA2-213	ENST00000439732	PHF20L1	A8MW92	1017 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	FAM155A	B1AL88	458 aa	Predicted RBP	11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	PATL2	C9JE40	543 aa	Known RBP	11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	GPAA1	O43292	621 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	APP	P05067	770 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	SDS	P20132	328 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	MCMDC2	Q4G0Z9	681 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	NOL9	Q5SY16	702 aa	Known RBP	11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	SPRYD7	Q5W111	196 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	ERO1B	Q86YB8	467 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	RASAL3	Q86YV0	1011 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	CLMN	Q96JQ2	1002 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	BEGAIN	Q9BUH8	593 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	EHD4	Q9H223	541 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	GINM1	Q9NU53	330 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	SERPINB13	Q9UIV8	391 aa		11.41	□□□□□ -0.58
SMARCA2-213	ENST00000439732	PRKAB2	O43741	272 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	AOC2	O75106	756 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	CHGB	P05060	677 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	KIF23	Q02241	960 aa	Predicted RBP	11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	PPAT	Q06203	517 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	VGLL4	Q14135	290 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	SDR42E1	Q8WUS8	393 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	WNK4	Q96J92	1243 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	ELP3	Q9H9T3	547 aa		11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.4	□□□□□ -0.58
SMARCA2-213	ENST00000439732	MANSC4	A6NHS7	340 aa	Predicted RBP	11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	GSG1L2	A8MUP6	293 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	USP17L12	C9JPN9	530 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	USP17L21	D6R901	530 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732		M0R2C6	588 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	INPP5B	P32019	993 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SREBF2	Q12772	1141 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	NMI	Q13287	307 aa	Predicted RBP	11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	C12orf60	Q5U649	245 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SCYL3	Q8IZE3	742 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	RUFY2	Q8WXA3	655 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	OPTN	Q96CV9	577 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	TBC1D2	Q9BYX2	928 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SWAP70	Q9UH65	585 aa		11.39	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SPDYE5	A6NIY4	337 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CA12	O43570	354 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SLC3A2	P08195	630 aa	Known RBP	11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ASNS	P08243	561 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CAP2	P40123	477 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	TDO2	P48775	406 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	PLCD1	P51178	756 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	GTF2A2	P52657	109 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	PPIL2	Q13356	520 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ALX1	Q15699	326 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SBK1	Q52WX2	424 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	OTUD7B	Q6GQQ9	843 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	IFNL3	Q8IZI9	196 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SEC62	Q99442	399 aa	Known RBP	11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ZNF287	Q9HBT7	754 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SNCAIP	Q9Y6H5	919 aa		11.38	□□□□□ -0.59
SMARCA2-213	ENST00000439732	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732		A0A0D9SFI3	127 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	FAM196B	A6NMK8	535 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CXCL11	O14625	94 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ALDH1A1	P00352	501 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	GSPT1	P15170	499 aa	Known RBP	11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	TM4SF4	P48230	202 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SNAPC2	Q13487	334 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CERKL	Q49MI3	558 aa	Predicted RBP	11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	TATDN1	Q6P1N9	297 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CTR9	Q6PD62	1173 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CWC27	Q6UX04	472 aa	Known RBP	11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	OTUD5	Q96G74	571 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	FAM227B	Q96M60	508 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	NAPB	Q9H115	298 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CABP5	Q9NP86	173 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	WBP1L	Q9NX94	342 aa		11.37	□□□□□ -0.59
SMARCA2-213	ENST00000439732	USP17L5	A8MUK1	530 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	MINDY4B	A8MYZ0	360 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CETP	P11597	493 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	PTPRA	P18433	802 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	GABPA	Q06546	454 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	MKRN3	Q13064	507 aa	Known RBP	11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	SLC4A8	Q2Y0W8	1093 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	BMP2KL	Q5H9B9	411 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CCDC17	Q96LX7	622 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ZIC5	Q96T25	663 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	AS3MT	Q9HBK9	375 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	ZHX2	Q9Y6X8	837 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	NAV1	Q8NEY1	1877 aa		11.36	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CCDC171	Q6TFL3	1326 aa		11.35	□□□□□ -0.59
SMARCA2-213	ENST00000439732	TESPA1	A2RU30	521 aa	Predicted RBP	11.35	□□□□□ -0.59
SMARCA2-213	ENST00000439732	IRF6	O14896	467 aa		11.35	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CYP2D6	P10635	497 aa		11.35	□□□□□ -0.59
SMARCA2-213	ENST00000439732	HSPD1	P10809	573 aa	Known RBP	11.35	□□□□□ -0.59
SMARCA2-213	ENST00000439732	CHML	P26374	656 aa		11.35	□□□□□ -0.59
SMARCA2-213	ENST00000439732	PDE4B	Q07343	736 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms