RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 B4E1Z4 1266 aa27.55■■■□□ 2
LONRF3-204ENST00000439603 PDE4BQ07343 736 aa27.55■■■□□ 2
LONRF3-204ENST00000439603 DYNLL2Q96FJ2 89 aa27.55■■■□□ 2
LONRF3-204ENST00000439603 CD2BP2O95400 341 aaKnown RBP27.55■■■□□ 2
LONRF3-204ENST00000439603 HLA-DOAP06340 250 aa27.55■■■□□ 2
LONRF3-204ENST00000439603 RRP12Q5JTH9 1297 aaKnown RBP27.55■■■□□ 2
LONRF3-204ENST00000439603 FAM151AQ8WW52 585 aa27.55■■■□□ 2
LONRF3-204ENST00000439603 ADARB2Q9NS39 739 aaKnown RBP27.55■■■□□ 2
LONRF3-204ENST00000439603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.55■■■□□ 2
LONRF3-204ENST00000439603 DDTLA6NHG4 134 aaPredicted RBP27.54■■■□□ 2
LONRF3-204ENST00000439603 MCM5P33992 734 aa27.54■■■□□ 2
LONRF3-204ENST00000439603 EXOSC10Q01780 885 aaKnown RBP27.54■■■□□ 2
LONRF3-204ENST00000439603 FAM83AQ86UY5 434 aa27.54■■■□□ 2
LONRF3-204ENST00000439603 ZSCAN29Q8IWY8 852 aaPredicted RBP27.54■■■□□ 2
LONRF3-204ENST00000439603 TCEANC2Q96MN5 208 aa27.54■■■□□ 2
LONRF3-204ENST00000439603 SH3BP5LQ7L8J4 393 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 NKX2-3Q8TAU0 364 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 CNTNAP1P78357 1384 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 ORC4O43929 436 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 PRDM1O75626 825 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 C16orf86Q6ZW13 317 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 HACL1Q9UJ83 578 aa27.53■■■□□ 2
LONRF3-204ENST00000439603 ATRNL1Q5VV63 1379 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 ASTN2O75129 1339 aaPredicted RBP27.52■■■□□ 2
LONRF3-204ENST00000439603 COL2A1P02458 1487 aaPredicted RBP27.52■■■□□ 2
LONRF3-204ENST00000439603 KDM4AO75164 1064 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 HIRAP54198 1017 aaPredicted RBP27.52■■■□□ 2
LONRF3-204ENST00000439603 CHST3Q7LGC8 479 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 ESR2Q92731 530 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 TBC1D2Q9BYX2 928 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 ALDH8A1Q9H2A2 487 aaPredicted RBP27.52■■■□□ 2
LONRF3-204ENST00000439603 ZNF287Q9HBT7 754 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 ZSWIM5Q9P217 1185 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 PI4KBQ9UBF8 816 aa27.52■■■□□ 2
LONRF3-204ENST00000439603 TNNI2P48788 182 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 TNFAIP1Q13829 316 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 EHD4Q9H223 541 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 MKNK2Q9HBH9 465 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 SERPINB13Q9UIV8 391 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 CDK8P49336 464 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 AK2P54819 239 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 GABPAQ06546 454 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 BECN1Q14457 450 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 CYB5R4Q7L1T6 521 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 HSCBQ8IWL3 235 aa27.51■■□□□ 1.99
LONRF3-204ENST00000439603 WDR19Q8NEZ3 1342 aa27.5■■□□□ 1.99
LONRF3-204ENST00000439603 PRC1O43663 620 aa27.5■■□□□ 1.99
LONRF3-204ENST00000439603 MCM2P49736 904 aa27.5■■□□□ 1.99
LONRF3-204ENST00000439603 ANTXR2P58335 489 aa27.5■■□□□ 1.99
LONRF3-204ENST00000439603 SLC44A5Q8NCS7 719 aa27.5■■□□□ 1.99
LONRF3-204ENST00000439603 RANBP6O60518 1105 aaKnown RBP27.49■■□□□ 1.99
LONRF3-204ENST00000439603 Q6ZUG5 572 aa27.49■■□□□ 1.99
LONRF3-204ENST00000439603 LRRC2Q9BYS8 371 aa27.49■■□□□ 1.99
LONRF3-204ENST00000439603 NT5C2P49902 561 aa27.49■■□□□ 1.99
LONRF3-204ENST00000439603 ANGEL2Q5VTE6 544 aaKnown RBP27.49■■□□□ 1.99
LONRF3-204ENST00000439603 FOXP4Q8IVH2 680 aaPredicted RBP27.49■■□□□ 1.99
LONRF3-204ENST00000439603 CSRNP1Q96S65 589 aa27.49■■□□□ 1.99
LONRF3-204ENST00000439603 TMEM39BQ9GZU3 492 aa27.49■■□□□ 1.99
LONRF3-204ENST00000439603 SWAP70Q9UH65 585 aa27.49■■□□□ 1.99
LONRF3-204ENST00000439603 FGD1P98174 961 aa27.48■■□□□ 1.99
LONRF3-204ENST00000439603 RASA3Q14644 834 aa27.48■■□□□ 1.99
LONRF3-204ENST00000439603 ANKRD1Q15327 319 aa27.48■■□□□ 1.99
LONRF3-204ENST00000439603 ZNF444Q8N0Y2 327 aaPredicted RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 IPO9Q96P70 1041 aaKnown RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 SCAF8Q9UPN6 1271 aaKnown RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 EPHX2P34913 555 aa27.47■■□□□ 1.99
LONRF3-204ENST00000439603 TOB2Q14106 344 aaPredicted RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 NOL8Q76FK4 1167 aaKnown RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 APOBEC3FQ8IUX4 373 aaKnown RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 FBXL16Q8N461 479 aa27.47■■□□□ 1.99
LONRF3-204ENST00000439603 CRACR2BQ8N4Y2 399 aaPredicted RBP27.47■■□□□ 1.99
LONRF3-204ENST00000439603 GGA3Q9NZ52 723 aa27.47■■□□□ 1.99
LONRF3-204ENST00000439603 TAOK2Q9UL54 1235 aa27.47■■□□□ 1.99
LONRF3-204ENST00000439603 IQCA1LA6NCM1 817 aa27.46■■□□□ 1.99
LONRF3-204ENST00000439603 RASA1P20936 1047 aa27.46■■□□□ 1.99
LONRF3-204ENST00000439603 USP50Q70EL3 339 aaPredicted RBP27.46■■□□□ 1.99
LONRF3-204ENST00000439603 METTL16Q86W50 562 aaKnown RBP27.46■■□□□ 1.99
LONRF3-204ENST00000439603 TMEM87BQ96K49 555 aa27.46■■□□□ 1.99
LONRF3-204ENST00000439603 AGXT2Q9BYV1 514 aa27.46■■□□□ 1.99
LONRF3-204ENST00000439603 PGAP2Q9UHJ9 254 aa27.46■■□□□ 1.99
LONRF3-204ENST00000439603 K7ELQ4 463 aaPredicted RBP27.45■■□□□ 1.99
LONRF3-204ENST00000439603 FAM47AQ5JRC9 791 aa27.45■■□□□ 1.99
LONRF3-204ENST00000439603 DEFB129Q9H1M3 183 aa27.45■■□□□ 1.99
LONRF3-204ENST00000439603 TSPY2A6NKD2 308 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 LARP6Q9BRS8 491 aaKnown RBP27.44■■□□□ 1.98
LONRF3-204ENST00000439603 MTA3Q9BTC8 594 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 TRIM34Q9BYJ4 488 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 LIMCH1Q9UPQ0 1083 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 POTECB2RU33 542 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 TFAP4Q01664 338 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 BRF1Q92994 677 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 DNAJC18Q9H819 358 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 SIPA1L1O43166 1804 aa27.44■■□□□ 1.98
LONRF3-204ENST00000439603 SLURP2P0DP57 97 aa27.43■■□□□ 1.98
LONRF3-204ENST00000439603 IQCA1Q86XH1 822 aa27.43■■□□□ 1.98
LONRF3-204ENST00000439603 IGDCC4Q8TDY8 1250 aa27.43■■□□□ 1.98
LONRF3-204ENST00000439603 ZKSCAN3Q9BRR0 538 aa27.43■■□□□ 1.98
LONRF3-204ENST00000439603 GPHNQ9NQX3 736 aaPredicted RBP27.43■■□□□ 1.98
LONRF3-204ENST00000439603 SCN4AP35499 1836 aa27.43■■□□□ 1.98
LONRF3-204ENST00000439603 PITPNM2Q9BZ72 1349 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms