RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
LMO3-207ENST00000439600 PTK2Q05397 1052 aa13.16□□□□□ -0.3
LMO3-207ENST00000439600 TTF1Q15361 905 aaPredicted RBP13.16□□□□□ -0.3
LMO3-207ENST00000439600 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
LMO3-207ENST00000439600 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
LMO3-207ENST00000439600 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
LMO3-207ENST00000439600 TDRD7Q8NHU6 1098 aaKnown RBP13.16□□□□□ -0.3
LMO3-207ENST00000439600 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
LMO3-207ENST00000439600 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
LMO3-207ENST00000439600 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
LMO3-207ENST00000439600 PRDM9Q9NQV7 894 aa13.16□□□□□ -0.3
LMO3-207ENST00000439600 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
LMO3-207ENST00000439600 ZNF609O15014 1411 aa13.15□□□□□ -0.3
LMO3-207ENST00000439600 TLL1O43897 1013 aa13.15□□□□□ -0.3
LMO3-207ENST00000439600 PDIA4P13667 645 aaKnown RBP13.15□□□□□ -0.3
LMO3-207ENST00000439600 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
LMO3-207ENST00000439600 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
LMO3-207ENST00000439600 TBC1D22AQ8WUA7 517 aa13.15□□□□□ -0.3
LMO3-207ENST00000439600 ZNF277Q9NRM2 450 aaPredicted RBP13.15□□□□□ -0.3
LMO3-207ENST00000439600 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
LMO3-207ENST00000439600 ZNRF3Q9ULT6 936 aa13.15□□□□□ -0.3
LMO3-207ENST00000439600 SALL3Q9BXA9 1300 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 IRS2Q9Y4H2 1338 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 WTIPA6NIX2 430 aaPredicted RBP13.14□□□□□ -0.31
LMO3-207ENST00000439600 NFKBIEO00221 500 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 PHKA1P46020 1223 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 RGS3P49796 1198 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 AOC3Q16853 763 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 SPTY2D1Q68D10 685 aaPredicted RBP13.14□□□□□ -0.31
LMO3-207ENST00000439600 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 SPATA5Q8NB90 893 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 HAUS7Q99871 368 aa13.14□□□□□ -0.31
LMO3-207ENST00000439600 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
LMO3-207ENST00000439600 MMP14P50281 582 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 FKBP1AP62942 108 aaKnown RBP13.13□□□□□ -0.31
LMO3-207ENST00000439600 TNIP1Q15025 636 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 EVI5LQ96CN4 794 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
LMO3-207ENST00000439600 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 ECE2O60344 883 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 KLRK1P26718 216 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 EIF6P56537 245 aaKnown RBP13.12□□□□□ -0.31
LMO3-207ENST00000439600 PDE4CQ08493 712 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 TTC22Q5TAA0 569 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 STRIP1Q5VSL9 837 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 ZSCAN25Q6NSZ9 544 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
LMO3-207ENST00000439600 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 GPR101Q96P66 508 aaPredicted RBP13.12□□□□□ -0.31
LMO3-207ENST00000439600 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 COL11A2P13942 1736 aaPredicted RBP13.12□□□□□ -0.31
LMO3-207ENST00000439600 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
LMO3-207ENST00000439600 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
LMO3-207ENST00000439600 MCAMP43121 646 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 RASGRF1Q13972 1273 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
LMO3-207ENST00000439600 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.31
LMO3-207ENST00000439600 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 PAG1Q9NWQ8 432 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
LMO3-207ENST00000439600 DLEC1Q9Y238 1755 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 COL4A1P02462 1669 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
LMO3-207ENST00000439600 HIP1O00291 1037 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 GTF2IP78347 998 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
LMO3-207ENST00000439600 FZD9O00144 591 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 GOLIM4O00461 696 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
LMO3-207ENST00000439600 ZAP70P43403 619 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 RASSF7Q02833 373 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
LMO3-207ENST00000439600 CIAPIN1Q6FI81 312 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 UCN2Q96RP3 112 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 UNC93B1Q9H1C4 597 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
LMO3-207ENST00000439600 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
LMO3-207ENST00000439600 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
LMO3-207ENST00000439600 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.32
LMO3-207ENST00000439600 LDHBP07195 334 aaKnown RBP13.08□□□□□ -0.32
LMO3-207ENST00000439600 LDHCP07864 332 aa13.08□□□□□ -0.32
LMO3-207ENST00000439600 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
LMO3-207ENST00000439600 RPS12P25398 132 aaKnown RBP13.08□□□□□ -0.32
LMO3-207ENST00000439600 GSTO1P78417 241 aa13.08□□□□□ -0.32
LMO3-207ENST00000439600 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms