RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PI4KBQ9UBF8 816 aa24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 HERC5Q9UII4 1024 aaKnown RBP24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 PTCH2Q9Y6C5 1203 aa24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 KIAA0100Q14667 2235 aaKnown RBP24.8■■□□□ 1.56
NCKIPSD-206ENST00000439518 GNRH1P01148 92 aa24.79■■□□□ 1.56
NCKIPSD-206ENST00000439518 CYP7A1P22680 504 aa24.79■■□□□ 1.56
NCKIPSD-206ENST00000439518 CAP2P40123 477 aa24.79■■□□□ 1.56
NCKIPSD-206ENST00000439518 RRP1BQ14684 758 aaKnown RBP24.79■■□□□ 1.56
NCKIPSD-206ENST00000439518 NDUFB9Q9Y6M9 179 aa24.79■■□□□ 1.56
NCKIPSD-206ENST00000439518 FLT1P17948 1338 aa24.79■■□□□ 1.56
NCKIPSD-206ENST00000439518 ZSWIM8A7E2V4 1837 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 TRIM75PA6NK02 468 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 HMMRO75330 724 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 IDH1O75874 414 aaKnown RBP24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 CYP2C8P10632 490 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 CTGFP29279 349 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 GADL1Q6ZQY3 521 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 METTL16Q86W50 562 aaKnown RBP24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 MAPKAPK5Q8IW41 473 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 KIF1BPQ96EK5 621 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 CHMP4BQ9H444 224 aaKnown RBP24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 ANTXR1Q9H6X2 564 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 SLC45A1Q9Y2W3 748 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 PTPRFP10586 1907 aa24.78■■□□□ 1.56
NCKIPSD-206ENST00000439518 DYNLL1P63167 89 aaKnown RBP24.77■■□□□ 1.56
NCKIPSD-206ENST00000439518 ZNF333Q96JL9 665 aa24.77■■□□□ 1.56
NCKIPSD-206ENST00000439518 POTEFA5A3E0 1075 aa24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 BCRP11274 1271 aa24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 PDE3AQ14432 1141 aa24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 TMED8Q6PL24 325 aaPredicted RBP24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 CLASRPQ8N2M8 674 aaKnown RBP24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 TRIM47Q96LD4 638 aa24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 SIPA1L1O43166 1804 aa24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 CDK5RAP2Q96SN8 1893 aa24.76■■□□□ 1.55
NCKIPSD-206ENST00000439518 FOCADQ5VW36 1801 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 APBB1O00213 710 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 PSMC4P43686 418 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 PRMT2P55345 433 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 MAP3K12Q12852 859 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 SLC9C1Q4G0N8 1177 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 C20orf194Q5TEA3 1177 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 FOXP4Q8IVH2 680 aaPredicted RBP24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 MAGEB6Q8N7X4 407 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 DNAJC18Q9H819 358 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 PALD1Q9ULE6 856 aa24.75■■□□□ 1.55
NCKIPSD-206ENST00000439518 RAB11FIP3O75154 756 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 SPP2Q13103 211 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 CERS3Q8IU89 383 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 MIGA1Q8NAN2 632 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 ZNF280CQ8ND82 737 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 TBC1D2Q9BYX2 928 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 AGTPBP1Q9UPW5 1226 aa24.74■■□□□ 1.55
NCKIPSD-206ENST00000439518 NBPF11Q86T75 865 aa24.73■■□□□ 1.55
NCKIPSD-206ENST00000439518 SRRDQ9UH36 339 aa24.73■■□□□ 1.55
NCKIPSD-206ENST00000439518 USP17L5A8MUK1 530 aa24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 ECM2O94769 699 aaPredicted RBP24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 OSBPP22059 807 aa24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 JAG1P78504 1218 aa24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 PROCA1Q8NCQ7 364 aaPredicted RBP24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 SAP30BPQ9UHR5 308 aaKnown RBP24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 RBBP6Q7Z6E9 1792 aaKnown RBP24.72■■□□□ 1.55
NCKIPSD-206ENST00000439518 ATAD5Q96QE3 1844 aa24.71■■□□□ 1.55
NCKIPSD-206ENST00000439518 FMNL1O95466 1100 aaPredicted RBP24.71■■□□□ 1.55
NCKIPSD-206ENST00000439518 IFIT2P09913 472 aaKnown RBP24.71■■□□□ 1.55
NCKIPSD-206ENST00000439518 TTF1Q15361 905 aaPredicted RBP24.71■■□□□ 1.55
NCKIPSD-206ENST00000439518 TREML2Q5T2D2 321 aa24.71■■□□□ 1.55
NCKIPSD-206ENST00000439518 WDR18Q9BV38 432 aa24.71■■□□□ 1.55
NCKIPSD-206ENST00000439518 HOXD10P28358 340 aa24.7■■□□□ 1.54
NCKIPSD-206ENST00000439518 SH3D19Q5HYK7 790 aa24.7■■□□□ 1.54
NCKIPSD-206ENST00000439518 CRACR2BQ8N4Y2 399 aaPredicted RBP24.7■■□□□ 1.54
NCKIPSD-206ENST00000439518 SH3TC2Q8TF17 1288 aa24.7■■□□□ 1.54
NCKIPSD-206ENST00000439518 HLA-DOAP06340 250 aa24.69■■□□□ 1.54
NCKIPSD-206ENST00000439518 ASNSP08243 561 aa24.69■■□□□ 1.54
NCKIPSD-206ENST00000439518 HMGCS2P54868 508 aa24.69■■□□□ 1.54
NCKIPSD-206ENST00000439518 GINM1Q9NU53 330 aa24.69■■□□□ 1.54
NCKIPSD-206ENST00000439518 LOC285556D6RIA3 1793 aa24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 EN2P19622 333 aaPredicted RBP24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 USP5P45974 858 aa24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 FCGRTP55899 365 aa24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 SHROOM1Q2M3G4 852 aaPredicted RBP24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 SMCR8Q8TEV9 937 aaPredicted RBP24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 RIOK1Q9BRS2 568 aaKnown RBP24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 TMEM106CQ9BVX2 250 aa24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 TRIM34Q9BYJ4 488 aa24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 AS3MTQ9HBK9 375 aa24.68■■□□□ 1.54
NCKIPSD-206ENST00000439518 BRCA2P51587 3418 aa24.67■■□□□ 1.54
NCKIPSD-206ENST00000439518 PDE6AP16499 860 aa24.67■■□□□ 1.54
NCKIPSD-206ENST00000439518 SLC9C2Q5TAH2 1124 aa24.67■■□□□ 1.54
NCKIPSD-206ENST00000439518 PNMA3Q9UL41 463 aa24.67■■□□□ 1.54
NCKIPSD-206ENST00000439518 MKI67P46013 3256 aaKnown RBP24.67■■□□□ 1.54
NCKIPSD-206ENST00000439518 MYPNQ86TC9 1320 aa24.66■■□□□ 1.54
NCKIPSD-206ENST00000439518 GOLIM4O00461 696 aa24.66■■□□□ 1.54
NCKIPSD-206ENST00000439518 SLC4A8Q2Y0W8 1093 aa24.66■■□□□ 1.54
NCKIPSD-206ENST00000439518 EHD4Q9H223 541 aa24.66■■□□□ 1.54
NCKIPSD-206ENST00000439518 ZBTB21Q9ULJ3 1066 aa24.66■■□□□ 1.54
NCKIPSD-206ENST00000439518 MAGEB6P1A0A0J9YX57 407 aa24.65■■□□□ 1.54
NCKIPSD-206ENST00000439518 GDF11O95390 407 aa24.65■■□□□ 1.54
NCKIPSD-206ENST00000439518 ATP5JP18859 108 aa24.65■■□□□ 1.54
NCKIPSD-206ENST00000439518 BACE1P56817 501 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms