RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ADD2P35612 726 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
MCF2L-216ENST00000439475 FLT1P17948 1338 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 IGF2BP3O00425 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
MCF2L-216ENST00000439475 POLR3DP05423 398 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-216ENST00000439475 DGKZQ13574 1117 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 ARHGEF6Q15052 776 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 UBE3CQ15386 1083 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-216ENST00000439475 FASTKD5Q7L8L6 764 aaKnown RBP12.64□□□□□ -0.39
MCF2L-216ENST00000439475 BRI3BPQ8WY22 251 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 EDC3Q96F86 508 aaKnown RBP12.64□□□□□ -0.39
MCF2L-216ENST00000439475 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 PALD1Q9ULE6 856 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
MCF2L-216ENST00000439475 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 ZFYP08048 801 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 PTPRAP18433 802 aa12.63□□□□□ -0.39
MCF2L-216ENST00000439475 CAP2P40123 477 aa12.63□□□□□ -0.39
MCF2L-216ENST00000439475 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
MCF2L-216ENST00000439475 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 PTPN18Q99952 460 aa12.63□□□□□ -0.39
MCF2L-216ENST00000439475 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
MCF2L-216ENST00000439475 TCRBV5S4A2TA0A5A2 114 aa12.62□□□□□ -0.39
MCF2L-216ENST00000439475 ASNSP08243 561 aa12.62□□□□□ -0.39
MCF2L-216ENST00000439475 METTL16Q86W50 562 aaKnown RBP12.62□□□□□ -0.39
MCF2L-216ENST00000439475 KBTBD3Q8NAB2 608 aa12.62□□□□□ -0.39
MCF2L-216ENST00000439475 EXOC6Q8TAG9 804 aa12.62□□□□□ -0.39
MCF2L-216ENST00000439475 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
MCF2L-216ENST00000439475 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
MCF2L-216ENST00000439475 MYH1P12882 1939 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 MX1P20591 662 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 SP3Q02447 781 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 CRHR2Q13324 411 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 MCOLN1Q9GZU1 580 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 EHD4Q9H223 541 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 MCM9Q9NXL9 1143 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 SERPINB13Q9UIV8 391 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 LAMB1P07942 1786 aa12.61□□□□□ -0.39
MCF2L-216ENST00000439475 MBD4O95243 580 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 SLURP2P0DP57 97 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 KIF22Q14807 665 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 GADL1Q6ZQY3 521 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 ZNF280CQ8ND82 737 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 ABHD8Q96I13 439 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 ARMT1Q9H993 441 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
MCF2L-216ENST00000439475 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-216ENST00000439475 PDHXO00330 501 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 RNF113AO15541 343 aaKnown RBP12.59□□□□□ -0.39
MCF2L-216ENST00000439475 TLR2O60603 784 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 SPP2Q13103 211 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 PABPC4Q13310 644 aaKnown RBP eCLIP12.59□□□□□ -0.39
MCF2L-216ENST00000439475 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-216ENST00000439475 PRRT2Q7Z6L0 340 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-216ENST00000439475 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 LCORLQ8N3X6 602 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 SDR42E1Q8WUS8 393 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 APPBP2Q92624 585 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-216ENST00000439475 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
MCF2L-216ENST00000439475 MYH7P12883 1935 aa12.58□□□□□ -0.39
MCF2L-216ENST00000439475 TRIM75PA6NK02 468 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 CAPN15O75808 1086 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 GNAT2P19087 354 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 DOCK1Q14185 1865 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 TSHZ3Q63HK5 1081 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 PI4K2BQ8TCG2 481 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 PARK7Q99497 189 aaKnown RBP12.58□□□□□ -0.4
MCF2L-216ENST00000439475 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 WDR18Q9BV38 432 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 SWAP70Q9UH65 585 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 PNMA3Q9UL41 463 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 SLC45A1Q9Y2W3 748 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 TRIM17Q9Y577 477 aa12.58□□□□□ -0.4
MCF2L-216ENST00000439475 CCDC85CA6NKD9 419 aa12.57□□□□□ -0.4
MCF2L-216ENST00000439475 GDF11O95390 407 aa12.57□□□□□ -0.4
MCF2L-216ENST00000439475 PLCD1P51178 756 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms