RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 SORBS3O60504 671 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 LEFTY1O75610 366 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 CTSHP09668 335 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 SEPT6Q14141 434 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 MEI1Q5TIA1 1274 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 HDXQ7Z353 690 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 IGSF5Q9NSI5 407 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 VTI1BQ9UEU0 232 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 CCDC39Q9UFE4 941 aa5.82□□□□□ -1.48
VPS41-207ENST00000439468 LIG3P49916 1009 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 INPP5AQ14642 412 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 WIPI1Q5MNZ9 446 aaPredicted RBP5.81□□□□□ -1.48
VPS41-207ENST00000439468 ZBTB37Q5TC79 503 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 C9orf131Q5VYM1 1079 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 LRFN4Q6PJG9 635 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 TMEM87AQ8NBN3 555 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 PLPPR2Q96GM1 343 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 DUSP23Q9BVJ7 150 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 CACNA2D2Q9NY47 1150 aa5.81□□□□□ -1.48
VPS41-207ENST00000439468 FANCGO15287 622 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 ITIH2P19823 946 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 ETF1P62495 437 aaKnown RBP5.8□□□□□ -1.48
VPS41-207ENST00000439468 PTPN11Q06124 597 aaPredicted RBP5.8□□□□□ -1.48
VPS41-207ENST00000439468 SCARA3Q6AZY7 606 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.8□□□□□ -1.48
VPS41-207ENST00000439468 UBE3DQ7Z6J8 389 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 KCT2Q8NC54 265 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 ZNF507Q8TCN5 953 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 GAL3ST3Q96A11 431 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 FBXL18Q96ME1 805 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 MIR1-1HGQ9H1L0 117 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 PCDHB5Q9Y5E4 795 aa5.8□□□□□ -1.48
VPS41-207ENST00000439468 F6X3S4 739 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 PRNPP04156 253 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 VAMP1P23763 118 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 RPS26P62854 115 aaKnown RBP5.79□□□□□ -1.48
VPS41-207ENST00000439468 TAF1CQ15572 869 aaPredicted RBP5.79□□□□□ -1.48
VPS41-207ENST00000439468 DIEXFQ68CQ4 756 aaKnown RBP5.79□□□□□ -1.48
VPS41-207ENST00000439468 MCTP1Q6DN14 999 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 ABI1Q8IZP0 508 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 PLD6Q8N2A8 252 aaKnown RBP5.79□□□□□ -1.48
VPS41-207ENST00000439468 PRDM10Q9NQV6 1147 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 SLC5A6Q9Y289 635 aa5.79□□□□□ -1.48
VPS41-207ENST00000439468 RLBP1P12271 317 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 ITGAEP38570 1179 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 CDK8P49336 464 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 ARMCX6Q7L4S7 300 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 NETO1Q8TDF5 533 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 JARID2Q92833 1246 aaPredicted RBP5.78□□□□□ -1.48
VPS41-207ENST00000439468 GTF2IRD1Q9UHL9 959 aa5.78□□□□□ -1.48
VPS41-207ENST00000439468 CEACAM5P06731 702 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 NTF4P34130 210 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 RING1Q06587 406 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 IFI16Q16666 785 aaKnown RBP5.77□□□□□ -1.49
VPS41-207ENST00000439468 ZNF574Q6ZN55 896 aaPredicted RBP5.77□□□□□ -1.49
VPS41-207ENST00000439468 AGMOQ6ZNB7 445 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 STK11IPQ8N1F8 1099 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 AGBL5Q8NDL9 886 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 CRELD1Q96HD1 420 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 WNT10AQ9GZT5 417 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 BCL11AQ9H165 835 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 TLR6Q9Y2C9 796 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 SNCAIPQ9Y6H5 919 aa5.77□□□□□ -1.49
VPS41-207ENST00000439468 GNAT3A8MTJ3 354 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 LRIG2O94898 1065 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 TCF3P15923 654 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 TAL1P17542 331 aaPredicted RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 GRK4P32298 578 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 ST13P50502 369 aaKnown RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 HDLBPQ00341 1268 aaKnown RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 BNIP3Q12983 259 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 PLCL1Q15111 1095 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 CYFIP1Q7L576 1253 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 XAGE3Q8WTP9 111 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 BCL7CQ8WUZ0 217 aaPredicted RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 MISP3Q96FF7 219 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 MIPEPQ99797 713 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 NOC4LQ9BVI4 516 aaKnown RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 FBRSQ9HAH7 460 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 PRDM5Q9NQX1 630 aaPredicted RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 TPX2Q9ULW0 747 aaKnown RBP5.76□□□□□ -1.49
VPS41-207ENST00000439468 U3KQE9 123 aa5.76□□□□□ -1.49
VPS41-207ENST00000439468 PGRP06401 933 aa5.75□□□□□ -1.49
VPS41-207ENST00000439468 TFE3P19532 575 aaPredicted RBP5.75□□□□□ -1.49
VPS41-207ENST00000439468 OXCT1P55809 520 aa5.75□□□□□ -1.49
VPS41-207ENST00000439468 AOC3Q16853 763 aa5.75□□□□□ -1.49
VPS41-207ENST00000439468 HID1Q8IV36 788 aa5.75□□□□□ -1.49
VPS41-207ENST00000439468 HRASLS5Q96KN8 279 aa5.75□□□□□ -1.49
VPS41-207ENST00000439468 FOXQ1Q9C009 403 aa5.75□□□□□ -1.49
VPS41-207ENST00000439468 PAK6Q9NQU5 681 aaPredicted RBP5.75□□□□□ -1.49
VPS41-207ENST00000439468 TMEM265A0A087WTH1 108 aa5.74□□□□□ -1.49
VPS41-207ENST00000439468 PAX4O43316 350 aa5.74□□□□□ -1.49
VPS41-207ENST00000439468 BPNT1O95861 308 aa5.74□□□□□ -1.49
VPS41-207ENST00000439468 GBP2P32456 591 aaPredicted RBP5.74□□□□□ -1.49
VPS41-207ENST00000439468 CD96P40200 585 aa5.74□□□□□ -1.49
VPS41-207ENST00000439468 FANCCQ00597 558 aa5.74□□□□□ -1.49
VPS41-207ENST00000439468 NKG7Q16617 165 aa5.74□□□□□ -1.49
VPS41-207ENST00000439468 METTL16Q86W50 562 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms