RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SLC26A6Q9BXS9 759 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 GOLGA6L9A6NEM1 432 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 GOLGA8AA7E2F4 631 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 CBFA2T2O43439 604 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 EZRP15311 586 aaKnown RBP17.9■□□□□ 0.46
DHFR-201ENST00000439211 GOLGA8FQ08AF8 430 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 GOLGA8DPQ0D2H9 430 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 GDAP1L1Q96MZ0 367 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 LZTFL1Q9NQ48 299 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 HOOK1Q9UJC3 728 aaKnown RBP17.9■□□□□ 0.46
DHFR-201ENST00000439211 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.9■□□□□ 0.46
DHFR-201ENST00000439211 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
DHFR-201ENST00000439211 RFX5P48382 616 aaPredicted RBP17.9■□□□□ 0.46
DHFR-201ENST00000439211 ANO1Q5XXA6 986 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 UTYO14607 1347 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 KIF5CO60282 957 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 ZFYP08048 801 aaPredicted RBP17.89■□□□□ 0.45
DHFR-201ENST00000439211 TMEM67Q5HYA8 995 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 B4E1Z4 1266 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 ATL3Q6DD88 541 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 NAPBQ9H115 298 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
DHFR-201ENST00000439211 RNF40O75150 1001 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 SUGCTQ9HAC7 445 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 ABCB6Q9NP58 842 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
DHFR-201ENST00000439211 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
DHFR-201ENST00000439211 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
DHFR-201ENST00000439211 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
DHFR-201ENST00000439211 SMARCC2Q8TAQ2 1214 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 FAM76AQ8TAV0 307 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 DHX58Q96C10 678 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 SH3TC1Q8TE82 1336 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 GSCP56915 257 aaPredicted RBP17.88■□□□□ 0.45
DHFR-201ENST00000439211 SEMA3FQ13275 785 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 IQCB1Q15051 598 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 CEP112Q8N8E3 955 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 ALDH8A1Q9H2A2 487 aaPredicted RBP17.88■□□□□ 0.45
DHFR-201ENST00000439211 SLC12A7Q9Y666 1083 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
DHFR-201ENST00000439211 KLHL10Q6JEL2 608 aa17.88■□□□□ 0.45
DHFR-201ENST00000439211 ZBTB43O43298 467 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 PAX7P23759 505 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 CASP8Q14790 479 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 APPBP2Q92624 585 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 NCAPD2Q15021 1401 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
DHFR-201ENST00000439211 CTAGE15A4D2H0 777 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 NDUFAB1O14561 156 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 CTAGE8P0CG41 777 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 ARMCX5Q6P1M9 558 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 CTAGE6Q86UF2 777 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 CADPS2Q86UW7 1296 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 CTAGE4Q8IX94 777 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 LINC00301Q8NCQ3 95 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 PUS7LQ9H0K6 701 aaKnown RBP17.87■□□□□ 0.45
DHFR-201ENST00000439211 IRAK4Q9NWZ3 460 aa17.87■□□□□ 0.45
DHFR-201ENST00000439211 PFKFB1P16118 471 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 BRAPQ7Z569 592 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 SPATS2LQ9NUQ6 558 aaKnown RBP17.86■□□□□ 0.45
DHFR-201ENST00000439211 TULP1O00294 542 aaPredicted RBP17.86■□□□□ 0.45
DHFR-201ENST00000439211 CEP85LQ5SZL2 805 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 ZKSCAN3Q9BRR0 538 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 PIK3C2AO00443 1686 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 NBPF26B4DH59 902 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 NBPF20Q3BBV1 942 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 RABL6Q3YEC7 729 aaPredicted RBP17.86■□□□□ 0.45
DHFR-201ENST00000439211 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 NBPF10Q6P3W6 841 aaKnown RBP17.86■□□□□ 0.45
DHFR-201ENST00000439211 ATG9AQ7Z3C6 839 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 NBPF15Q8N660 670 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 PPP2R2CQ9Y2T4 447 aa17.86■□□□□ 0.45
DHFR-201ENST00000439211 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 FANCCQ00597 558 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 RASSF8Q8NHQ8 419 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 RTEL1Q9NZ71 1219 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 COL15A1P39059 1388 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 RPSAP08865 295 aaKnown RBP17.85■□□□□ 0.45
DHFR-201ENST00000439211 CPLX3Q8WVH0 158 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 CLIC6Q96NY7 704 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 PARP3Q9Y6F1 533 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 MINDY4BA8MYZ0 360 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 H7C1W4 665 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 STARD3NLO95772 234 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 FOXO4P98177 505 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 ACTN3Q08043 901 aaPredicted RBP17.85■□□□□ 0.45
DHFR-201ENST00000439211 VPS37DQ86XT2 251 aa17.85■□□□□ 0.45
DHFR-201ENST00000439211 ZEB2O60315 1214 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 GRIPAP1Q4V328 841 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 ABCF2Q9UG63 623 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms