RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IDH1O75874 414 aaKnown RBP22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 AACSQ86V21 672 aa22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 TGFBRAP1Q8WUH2 860 aa22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 PI4KBQ9UBF8 816 aa22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 MYO5AQ9Y4I1 1855 aaKnown RBP22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 ADGRA2Q96PE1 1338 aa22.53■■□□□ 1.2
AC004540.1-201ENST00000439120 PHIPQ8WWQ0 1821 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 ATAD5Q96QE3 1844 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 PPP4CP60510 307 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 SLC4A8Q2Y0W8 1093 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 CCDC84Q86UT8 332 aaPredicted RBP22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 MAPKAPK5Q8IW41 473 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 SMCR8Q8TEV9 937 aaPredicted RBP22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 PIH1D3Q9NQM4 214 aaKnown RBP22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 DDX19BQ9UMR2 479 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 SLC45A1Q9Y2W3 748 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 PTPRFP10586 1907 aa22.52■■□□□ 1.2
AC004540.1-201ENST00000439120 PDE4DIPQ5VU43 2346 aa22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 HMMRO75330 724 aa22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 CYP7A1P22680 504 aa22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 PRPF38BQ5VTL8 546 aaKnown RBP22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 ADGRA1Q86SQ6 560 aa22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 CRACR2BQ8N4Y2 399 aaPredicted RBP22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 TRIM47Q96LD4 638 aa22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 TBC1D2Q9BYX2 928 aa22.51■■□□□ 1.19
AC004540.1-201ENST00000439120 MYCP01106 439 aaPredicted RBP22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 CAP2P40123 477 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 FCGRTP55899 365 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 RAET1EQ8TD07 263 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 SH3TC2Q8TF17 1288 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 CHMP4BQ9H444 224 aaKnown RBP22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 SRRDQ9UH36 339 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 AGTPBP1Q9UPW5 1226 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 COG6Q9Y2V7 657 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 FLT1P17948 1338 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 FOCADQ5VW36 1801 aa22.5■■□□□ 1.19
AC004540.1-201ENST00000439120 CDK5RAP2Q96SN8 1893 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 APBB1O00213 710 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 HLA-DOAP06340 250 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 OSBPP22059 807 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 CERS3Q8IU89 383 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 RPAP2Q8IXW5 612 aaPredicted RBP22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 ZNF280CQ8ND82 737 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 AS3MTQ9HBK9 375 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 IL1RAPL2Q9NP60 686 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 RCAN3Q9UKA8 241 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 PNMA3Q9UL41 463 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 MYPNQ86TC9 1320 aa22.49■■□□□ 1.19
AC004540.1-201ENST00000439120 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 BCRP11274 1271 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 EN2P19622 333 aaPredicted RBP22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 MAP3K12Q12852 859 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 SPP2Q13103 211 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 CLASRPQ8N2M8 674 aaKnown RBP22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 MAGEB6Q8N7X4 407 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 RHPN1Q8TCX5 695 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 NDUFB9Q9Y6M9 179 aa22.48■■□□□ 1.19
AC004540.1-201ENST00000439120 CTGFP29279 349 aa22.47■■□□□ 1.19
AC004540.1-201ENST00000439120 MIGA1Q8NAN2 632 aa22.47■■□□□ 1.19
AC004540.1-201ENST00000439120 PROCA1Q8NCQ7 364 aaPredicted RBP22.47■■□□□ 1.19
AC004540.1-201ENST00000439120 KIF1BPQ96EK5 621 aa22.47■■□□□ 1.19
AC004540.1-201ENST00000439120 SAP30BPQ9UHR5 308 aaKnown RBP22.47■■□□□ 1.19
AC004540.1-201ENST00000439120 PALD1Q9ULE6 856 aa22.47■■□□□ 1.19
AC004540.1-201ENST00000439120 MGAMO43451 1857 aa22.46■■□□□ 1.19
AC004540.1-201ENST00000439120 USP5P45974 858 aa22.46■■□□□ 1.19
AC004540.1-201ENST00000439120 DYNLL1P63167 89 aaKnown RBP22.46■■□□□ 1.19
AC004540.1-201ENST00000439120 PABPC4Q13310 644 aaKnown RBP eCLIP22.46■■□□□ 1.19
AC004540.1-201ENST00000439120 FOXP4Q8IVH2 680 aaPredicted RBP22.46■■□□□ 1.19
AC004540.1-201ENST00000439120 SIPA1L1O43166 1804 aa22.45■■□□□ 1.19
AC004540.1-201ENST00000439120 ASNSP08243 561 aa22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 IFIT2P09913 472 aaKnown RBP22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 HMGCS2P54868 508 aa22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 TTF1Q15361 905 aaPredicted RBP22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 TREML2Q5T2D2 321 aa22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 TMED8Q6PL24 325 aaPredicted RBP22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 ANTXR1Q9H6X2 564 aa22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 ZBTB40Q9NUA8 1239 aa22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 BIN2Q9UBW5 565 aaPredicted RBP22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 LOC285556D6RIA3 1793 aa22.45■■□□□ 1.18
AC004540.1-201ENST00000439120 GRK4P32298 578 aa22.44■■□□□ 1.18
AC004540.1-201ENST00000439120 PRKCZQ05513 592 aa22.44■■□□□ 1.18
AC004540.1-201ENST00000439120 RRP1BQ14684 758 aaKnown RBP22.44■■□□□ 1.18
AC004540.1-201ENST00000439120 KIAA0100Q14667 2235 aaKnown RBP22.43■■□□□ 1.18
AC004540.1-201ENST00000439120 TNPO2O14787 897 aaKnown RBP22.43■■□□□ 1.18
AC004540.1-201ENST00000439120 ANKRD13CQ8N6S4 541 aa22.43■■□□□ 1.18
AC004540.1-201ENST00000439120 TMOD4Q9NZQ9 345 aa22.43■■□□□ 1.18
AC004540.1-201ENST00000439120 MYH1P12882 1939 aa22.43■■□□□ 1.18
AC004540.1-201ENST00000439120 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
AC004540.1-201ENST00000439120 GINM1Q9NU53 330 aa22.42■■□□□ 1.18
AC004540.1-201ENST00000439120 GDF11O95390 407 aa22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 UBXN2AP68543 259 aa22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 MTMR2Q13614 643 aa22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 METTL16Q86W50 562 aaKnown RBP22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 SLAIN1Q8ND83 568 aa22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 DNAJC2Q99543 621 aaKnown RBP22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 WDR18Q9BV38 432 aa22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 DNAJC18Q9H819 358 aa22.41■■□□□ 1.18
AC004540.1-201ENST00000439120 BRCA2P51587 3418 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms