RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ZNF594Q96JF6 807 aaPredicted RBP14.12□□□□□ -0.15
CSTF3-203ENST00000438862 FAM161BQ96MY7 647 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 ADAMTS8Q9UP79 889 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 ZHX2Q9Y6X8 837 aa14.12□□□□□ -0.15
CSTF3-203ENST00000438862 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
CSTF3-203ENST00000438862 CHAF1AQ13111 956 aaPredicted RBP14.11□□□□□ -0.15
CSTF3-203ENST00000438862 LMBR1LQ6UX01 489 aa14.11□□□□□ -0.15
CSTF3-203ENST00000438862 GADL1Q6ZQY3 521 aa14.11□□□□□ -0.15
CSTF3-203ENST00000438862 MAFAQ8NHW3 353 aaPredicted RBP14.11□□□□□ -0.15
CSTF3-203ENST00000438862 DNAAF4Q8WXU2 420 aa14.11□□□□□ -0.15
CSTF3-203ENST00000438862 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
CSTF3-203ENST00000438862 MDM2Q00987 491 aaPredicted RBP14.1□□□□□ -0.15
CSTF3-203ENST00000438862 FAM110CQ1W6H9 321 aa14.1□□□□□ -0.15
CSTF3-203ENST00000438862 CAVIN4Q5BKX8 364 aa14.1□□□□□ -0.15
CSTF3-203ENST00000438862 CDX2Q99626 313 aaPredicted RBP14.1□□□□□ -0.15
CSTF3-203ENST00000438862 PICK1Q9NRD5 415 aa14.1□□□□□ -0.15
CSTF3-203ENST00000438862 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
CSTF3-203ENST00000438862 FLIIQ13045 1269 aa14.09□□□□□ -0.15
CSTF3-203ENST00000438862 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
CSTF3-203ENST00000438862 SCYL3Q8IZE3 742 aa14.09□□□□□ -0.15
CSTF3-203ENST00000438862 ANKRD13CQ8N6S4 541 aa14.09□□□□□ -0.15
CSTF3-203ENST00000438862 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
CSTF3-203ENST00000438862 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
CSTF3-203ENST00000438862 IQSEC3Q9UPP2 1182 aaPredicted RBP14.09□□□□□ -0.15
CSTF3-203ENST00000438862 PFASO15067 1338 aa14.09□□□□□ -0.15
CSTF3-203ENST00000438862 COL6A1P12109 1028 aa14.08□□□□□ -0.16
CSTF3-203ENST00000438862 PTPRAP18433 802 aa14.08□□□□□ -0.16
CSTF3-203ENST00000438862 TCP10Q12799 353 aa14.08□□□□□ -0.16
CSTF3-203ENST00000438862 FKBP5Q13451 457 aaPredicted RBP14.08□□□□□ -0.16
CSTF3-203ENST00000438862 SEMA6BQ9H3T3 888 aa14.08□□□□□ -0.16
CSTF3-203ENST00000438862 GJD2Q9UKL4 321 aa14.08□□□□□ -0.16
CSTF3-203ENST00000438862 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.16
CSTF3-203ENST00000438862 PHF20L1A8MW92 1017 aa14.07□□□□□ -0.16
CSTF3-203ENST00000438862 GCLCP48506 637 aaPredicted RBP14.07□□□□□ -0.16
CSTF3-203ENST00000438862 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
CSTF3-203ENST00000438862 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
CSTF3-203ENST00000438862 APAF1O14727 1248 aa14.06□□□□□ -0.16
CSTF3-203ENST00000438862 EPHA10Q5JZY3 1008 aa14.06□□□□□ -0.16
CSTF3-203ENST00000438862 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
CSTF3-203ENST00000438862 ZNF687Q8N1G0 1237 aa14.06□□□□□ -0.16
CSTF3-203ENST00000438862 LAMA2P24043 3122 aaKnown RBP14.06□□□□□ -0.16
CSTF3-203ENST00000438862 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
CSTF3-203ENST00000438862 PTPRFP10586 1907 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 CACNA1FO60840 1977 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 TNFRSF10AO00220 468 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 TRIM32Q13049 653 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
CSTF3-203ENST00000438862 CDC42EP5Q6NZY7 148 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 MFRPQ9BY79 579 aa14.05□□□□□ -0.16
CSTF3-203ENST00000438862 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
CSTF3-203ENST00000438862 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
CSTF3-203ENST00000438862 PLA2G5P39877 138 aa14.04□□□□□ -0.16
CSTF3-203ENST00000438862 MAP3K10Q02779 954 aa14.04□□□□□ -0.16
CSTF3-203ENST00000438862 NFIAQ12857 509 aa14.04□□□□□ -0.16
CSTF3-203ENST00000438862 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
CSTF3-203ENST00000438862 TRMT44Q8IYL2 757 aaKnown RBP14.04□□□□□ -0.16
CSTF3-203ENST00000438862 WDR66Q8TBY9 1149 aa14.04□□□□□ -0.16
CSTF3-203ENST00000438862 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
CSTF3-203ENST00000438862 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
CSTF3-203ENST00000438862 PRUNE2Q8WUY3 3088 aa14.04□□□□□ -0.16
CSTF3-203ENST00000438862 TTC28Q96AY4 2481 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 TRIM75PA6NK02 468 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 GRM8O00222 908 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
CSTF3-203ENST00000438862 ARSIQ5FYB1 569 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 TJAP1Q5JTD0 557 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 BEND3Q5T5X7 828 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
CSTF3-203ENST00000438862 TRIB2Q92519 343 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 FAM122AQ96E09 287 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 DAGLAQ9Y4D2 1042 aa14.03□□□□□ -0.16
CSTF3-203ENST00000438862 ENTPD3O75355 529 aa14.02□□□□□ -0.17
CSTF3-203ENST00000438862 PDE8BO95263 885 aa14.02□□□□□ -0.17
CSTF3-203ENST00000438862 MYLIPQ8WY64 445 aa14.02□□□□□ -0.17
CSTF3-203ENST00000438862 KHSRPQ92945 711 aaKnown RBP eCLIP14.02□□□□□ -0.17
CSTF3-203ENST00000438862 C9orf78Q9NZ63 289 aaPredicted RBP14.02□□□□□ -0.17
CSTF3-203ENST00000438862 PRKAG2Q9UGJ0 569 aa14.02□□□□□ -0.17
CSTF3-203ENST00000438862 PHIPQ8WWQ0 1821 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 ATRNL1Q5VV63 1379 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 FOSL2P15408 326 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 CYP2B6P20813 491 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 SMAD3P84022 425 aaKnown RBP14.01□□□□□ -0.17
CSTF3-203ENST00000438862 METTL24Q5JXM2 366 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 ZFPM1Q8IX07 1006 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 TSR2Q969E8 191 aaKnown RBP14.01□□□□□ -0.17
CSTF3-203ENST00000438862 NUDT12Q9BQG2 462 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 STK24Q9Y6E0 443 aa14.01□□□□□ -0.17
CSTF3-203ENST00000438862 DOCK2Q92608 1830 aa14□□□□□ -0.17
CSTF3-203ENST00000438862 MUC3AQ02505 3323 aa14□□□□□ -0.17
CSTF3-203ENST00000438862 CACNB2Q08289 660 aaPredicted RBP14□□□□□ -0.17
CSTF3-203ENST00000438862 SOCS4Q8WXH5 440 aa14□□□□□ -0.17
CSTF3-203ENST00000438862 IDI2Q9BXS1 227 aa14□□□□□ -0.17
CSTF3-203ENST00000438862 TBC1D2Q9BYX2 928 aa14□□□□□ -0.17
CSTF3-203ENST00000438862 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
CSTF3-203ENST00000438862 PLXNB2O15031 1838 aa13.99□□□□□ -0.17
CSTF3-203ENST00000438862 TMEM265A0A087WTH1 108 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms