RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 UBE3DQ7Z6J8 389 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 KCT2Q8NC54 265 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 WNT10AQ9GZT5 417 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 TACC3Q9Y6A5 838 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 TFE3P19532 575 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P12-201ENST00000438745 CDK8P49336 464 aa5.9□□□□□ -1.46
HMGB3P12-201ENST00000438745 HDXQ7Z353 690 aa5.9□□□□□ -1.46
HMGB3P12-201ENST00000438745 ZNF507Q8TCN5 953 aa5.9□□□□□ -1.46
HMGB3P12-201ENST00000438745 PLPPR2Q96GM1 343 aa5.9□□□□□ -1.46
HMGB3P12-201ENST00000438745 HEXIM2Q96MH2 286 aaKnown RBP5.9□□□□□ -1.46
HMGB3P12-201ENST00000438745 COL17A1Q9UMD9 1497 aaPredicted RBP5.9□□□□□ -1.47
HMGB3P12-201ENST00000438745 OXCT1P55809 520 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 SLBPQ14493 270 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 CCDC84Q86UT8 332 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 WFDC3Q8IUB2 231 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 ELMO3Q96BJ8 720 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 CRELD1Q96HD1 420 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 RSRP1Q9BUV0 290 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 LRRC4CQ9HCJ2 640 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 SSU72Q9NP77 194 aaKnown RBP5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 U3KQE9 123 aa5.89□□□□□ -1.47
HMGB3P12-201ENST00000438745 IGF2BP3O00425 579 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB3P12-201ENST00000438745 LRIG2O94898 1065 aa5.88□□□□□ -1.47
HMGB3P12-201ENST00000438745 VSIG10LQ86VR7 867 aa5.88□□□□□ -1.47
HMGB3P12-201ENST00000438745 PHC3Q8NDX5 983 aa5.88□□□□□ -1.47
HMGB3P12-201ENST00000438745 PRDM10Q9NQV6 1147 aa5.88□□□□□ -1.47
HMGB3P12-201ENST00000438745 ADGRE2Q9UHX3 823 aa5.88□□□□□ -1.47
HMGB3P12-201ENST00000438745 ZBTB7CA1YPR0 619 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 EOMESO95936 686 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 RPL6Q02878 288 aaKnown RBP5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 SEPT6Q14141 434 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 MRPL58Q14197 206 aaKnown RBP5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 CDC37L1Q7L3B6 337 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 NETO1Q8TDF5 533 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 BCL7CQ8WUZ0 217 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 FBXL18Q96ME1 805 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 MIR1-1HGQ9H1L0 117 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 TNKS2Q9H2K2 1166 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 FBRSQ9HAH7 460 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 PAK6Q9NQU5 681 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 PLAGL2Q9UPG8 496 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 TLR6Q9Y2C9 796 aa5.87□□□□□ -1.47
HMGB3P12-201ENST00000438745 FAM221AA4D161 298 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 ITGAEP38570 1179 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 LMNB2Q03252 620 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 MAP3K11Q16584 847 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 NKG7Q16617 165 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 TSNAXIP1Q2TAA8 658 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 WIPI1Q5MNZ9 446 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 CBLL1Q75N03 491 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 PLD6Q8N2A8 252 aaKnown RBP5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 BCL2L13Q9BXK5 485 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 FOXQ1Q9C009 403 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 GOLGA2P5Q9HBQ8 144 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 VAV3Q9UKW4 847 aa5.86□□□□□ -1.47
HMGB3P12-201ENST00000438745 SLITRK5O94991 958 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 CAMK2GQ13555 558 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 ZNF326Q5BKZ1 582 aaKnown RBP5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 ARMCX6Q7L4S7 300 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 SPRED2Q7Z698 418 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 HID1Q8IV36 788 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 ABI1Q8IZP0 508 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 STK11IPQ8N1F8 1099 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 FAM181AQ8N9Y4 354 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 MFSD2AQ8NA29 543 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 RHOVQ96L33 236 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 MRS2Q9HD23 443 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 PICK1Q9NRD5 415 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 ANGEL1Q9UNK9 670 aaKnown RBP5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 SNX11Q9Y5W9 270 aa5.85□□□□□ -1.47
HMGB3P12-201ENST00000438745 CNTNAP4Q9C0A0 1308 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 PRAMEF27A3QJZ7 478 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 CILPO75339 1184 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 CST3P01034 146 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 CEACAM5P06731 702 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 GRK4P32298 578 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 IRAK1P51617 712 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 PRKCQQ04759 706 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 LDLRAD1Q5T700 205 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 RELL1Q8IUW5 271 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 MRPL41Q8IXM3 137 aaKnown RBP5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 GATAD2BQ8WXI9 593 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 TMEM74Q96NL1 305 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 KCNQ5Q9NR82 932 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 VTI1BQ9UEU0 232 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 GTF2IRD1Q9UHL9 959 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 SLC5A6Q9Y289 635 aa5.84□□□□□ -1.47
HMGB3P12-201ENST00000438745 NISCHQ9Y2I1 1504 aa5.84□□□□□ -1.48
HMGB3P12-201ENST00000438745 PRR36Q9H6K5 1346 aa5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 TMEM265A0A087WTH1 108 aa5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 PF4P02776 101 aa5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 LMNB1P20700 586 aa5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 GARTP22102 1010 aa5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 ETF1P62495 437 aaKnown RBP5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 BNIP3Q12983 259 aa5.83□□□□□ -1.48
HMGB3P12-201ENST00000438745 PWP1Q13610 501 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms