RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 EFCAB8A8MWE9 144 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 BTBD18B2RXH4 712 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ZPR1O75312 459 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 PDE6AP16499 860 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ADORA1P30542 326 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 KIF23Q02241 960 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 NCBP1Q09161 790 aaKnown RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CD163L1Q9NR16 1453 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 DIP2CQ9Y2E4 1556 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 PATL2C9JE40 543 aaKnown RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 HEATR3Q7Z4Q2 680 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 VPS36Q86VN1 386 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ZBTB9Q96C00 473 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 DRC1Q96MC2 740 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CTDP1Q9Y5B0 961 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ERBB3P21860 1342 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 NUTM2BA6NNL0 878 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 NUTM2EB1AL46 878 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 M0R2C6 588 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 PPP6R2O75170 966 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 KRT9P35527 623 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 TTC38Q5R3I4 469 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC122Q5T0U0 273 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 APOA5Q6Q788 366 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CYP26C1Q6V0L0 522 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 FCHSD1Q86WN1 690 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 TRIML1Q8N9V2 468 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 FERMT2Q96AC1 680 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CAPZA3Q96KX2 299 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 RSPH14Q9UHP6 348 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 SALL3Q9BXA9 1300 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 NRKQ7Z2Y5 1582 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 PPLO60437 1756 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 NCAPD2Q15021 1401 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 BICDL2A1A5D9 508 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 PCCAP05165 728 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 TSPY3P0CV98 308 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 TSPY8P0CW00 308 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 UBE3CQ15386 1083 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 TICAM2Q86XR7 235 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 LRRC27Q9C0I9 530 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 ADGRL3Q9HAR2 1447 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 STX10O60499 249 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 PRDM1O75626 825 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 OAS2P29728 719 aaKnown RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 ATP6V1AP38606 617 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 PAK1Q13153 545 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 HLTFQ14527 1009 aaKnown RBP eCLIP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 IFNL3Q8IZI9 196 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 ZNF654Q8IZM8 581 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 ZBTB38Q8NAP3 1195 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 DESI2Q9BSY9 194 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 KCNF1Q9H3M0 494 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 MMRN2Q9H8L6 949 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 PXDNLA1KZ92 1463 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 SMC1AQ14683 1233 aaKnown RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 GPHNQ9NQX3 736 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 ATG3Q9NT62 314 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 SEPT11Q9NVA2 429 aaKnown RBP7.55□□□□□ -1.2
CSDE1-205ENST00000438362 MCM9Q9NXL9 1143 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 VPS54Q9P1Q0 977 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
CSDE1-205ENST00000438362 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-205ENST00000438362 NAPAP54920 295 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 PIK3AP1Q6ZUJ8 805 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 SMARCC2Q8TAQ2 1214 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 STAMQ92783 540 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 RFX7Q2KHR2 1363 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 FRMPD1Q5SYB0 1578 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 HSF2BPO75031 334 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 CTSWP56202 376 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 PLIN2Q99541 437 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 TAB2Q9NYJ8 693 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.54□□□□□ -1.2
CSDE1-205ENST00000438362 AK9Q5TCS8 1911 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 MED23Q9ULK4 1368 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 H7C1W4 665 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 ZNF76P36508 570 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 BRD3Q15059 726 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 ZFYVE27Q5T4F4 411 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 FANCBQ8NB91 859 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC51Q96ER9 411 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 NLRP3Q96P20 1036 aa7.54□□□□□ -1.2
CSDE1-205ENST00000438362 SETD1BQ9UPS6 1966 aaKnown RBP7.54□□□□□ -1.2
CSDE1-205ENST00000438362 hCG_1642624A0A1W2PR95 340 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 MPHOSPH10O00566 681 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 NOP2P46087 812 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms