RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 ATP8A2Q9NTI2 1148 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 SNCAIPQ9Y6H5 919 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 SPDYE5A6NIY4 337 aa19.7■□□□□ 0.74
CTSD-205ENST00000438213 POLR3DP05423 398 aaPredicted RBP19.7■□□□□ 0.74
CTSD-205ENST00000438213 PUS7LQ9H0K6 701 aaKnown RBP19.7■□□□□ 0.74
CTSD-205ENST00000438213 FOXN1O15353 648 aa19.69■□□□□ 0.74
CTSD-205ENST00000438213 GTF2A2P52657 109 aa19.69■□□□□ 0.74
CTSD-205ENST00000438213 PPATQ06203 517 aa19.69■□□□□ 0.74
CTSD-205ENST00000438213 METTL16Q86W50 562 aaKnown RBP19.69■□□□□ 0.74
CTSD-205ENST00000438213 SCYL3Q8IZE3 742 aa19.69■□□□□ 0.74
CTSD-205ENST00000438213 OTUD5Q96G74 571 aa19.69■□□□□ 0.74
CTSD-205ENST00000438213 MCM9Q9NXL9 1143 aa19.69■□□□□ 0.74
CTSD-205ENST00000438213 TRIM6-TRIM34B2RNG4 842 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 CHGBP05060 677 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 GJA5P36382 358 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 PPIL2Q13356 520 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 OTUD7BQ6GQQ9 843 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 AMOTL1Q8IY63 956 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 SDR42E1Q8WUS8 393 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 OSBP2Q969R2 916 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 DCP1AQ9NPI6 582 aaPredicted RBP19.68■□□□□ 0.74
CTSD-205ENST00000438213 SLC4A4Q9Y6R1 1079 aa19.68■□□□□ 0.74
CTSD-205ENST00000438213 THSD7BQ9C0I4 1608 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 TRPA1O75762 1119 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 ALDH1A1P00352 501 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 GNAT2P19087 354 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 RILPL2Q969X0 211 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 STRBPQ96SI9 672 aaKnown RBP19.67■□□□□ 0.74
CTSD-205ENST00000438213 EHD4Q9H223 541 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 RNF186Q9NXI6 227 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 SAGE1Q9NXZ1 904 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 SERPINB13Q9UIV8 391 aa19.67■□□□□ 0.74
CTSD-205ENST00000438213 FAM196BA6NMK8 535 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 PRKAB2O43741 272 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 SLURP2P0DP57 97 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 CAP2P40123 477 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 ZMYM1Q5SVZ6 1142 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 PCNTO95613 3336 aa19.66■□□□□ 0.74
CTSD-205ENST00000438213 IRF6O14896 467 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 CETPP11597 493 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 PTPRAP18433 802 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 SLC4A8Q2Y0W8 1093 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 GIMAP6Q6P9H5 292 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 MS4A4AQ96JQ5 239 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 GINM1Q9NU53 330 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 TAOK2Q9UL54 1235 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 ZHX2Q9Y6X8 837 aa19.65■□□□□ 0.74
CTSD-205ENST00000438213 MYH7P12883 1935 aa19.64■□□□□ 0.74
CTSD-205ENST00000438213 TESPA1A2RU30 521 aaPredicted RBP19.64■□□□□ 0.73
CTSD-205ENST00000438213 CXCL11O14625 94 aa19.64■□□□□ 0.73
CTSD-205ENST00000438213 GPAA1O43292 621 aa19.64■□□□□ 0.73
CTSD-205ENST00000438213 PLCD1P51178 756 aa19.64■□□□□ 0.73
CTSD-205ENST00000438213 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
CTSD-205ENST00000438213 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
CTSD-205ENST00000438213 CCL15-CCL14A0A0B4J2E2 113 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 PATL2C9JE40 543 aaKnown RBP19.63■□□□□ 0.73
CTSD-205ENST00000438213 APPP05067 770 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 HSPA8P11142 646 aaKnown RBP19.63■□□□□ 0.73
CTSD-205ENST00000438213 PDE4AP27815 886 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 LBX1P52954 281 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 CCL15Q16663 113 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 TBC1D2Q9BYX2 928 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 PRDM10Q9NQV6 1147 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 HELLSQ9NRZ9 838 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 KCNH4Q9UQ05 1017 aa19.63■□□□□ 0.73
CTSD-205ENST00000438213 CDK5RAP2Q96SN8 1893 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 FOCADQ5VW36 1801 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 USP17L12C9JPN9 530 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 USP17L21D6R901 530 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 M0R2C6 588 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 ASNSP08243 561 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 TATDN1Q6P1N9 297 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 NACAP1Q9BZK3 213 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 OTOFQ9HC10 1997 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 MYH1P12882 1939 aa19.62■□□□□ 0.73
CTSD-205ENST00000438213 USP17L5A8MUK1 530 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 GSG1L2A8MUP6 293 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 CERKLQ49MI3 558 aaPredicted RBP19.61■□□□□ 0.73
CTSD-205ENST00000438213 C12orf60Q5U649 245 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 BRI3BPQ8WY22 251 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 SEC62Q99442 399 aaKnown RBP19.61■□□□□ 0.73
CTSD-205ENST00000438213 DNAJC18Q9H819 358 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 AS3MTQ9HBK9 375 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 SWAP70Q9UH65 585 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 TSKSQ9UJT2 592 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 AFG3L2Q9Y4W6 797 aa19.61■□□□□ 0.73
CTSD-205ENST00000438213 HIP1O00291 1037 aa19.6■□□□□ 0.73
CTSD-205ENST00000438213 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
CTSD-205ENST00000438213 CTR9Q6PD62 1173 aa19.6■□□□□ 0.73
CTSD-205ENST00000438213 PTPN18Q99952 460 aa19.6■□□□□ 0.73
CTSD-205ENST00000438213 CABP5Q9NP86 173 aa19.6■□□□□ 0.73
CTSD-205ENST00000438213 ARPP21Q9UBL0 812 aaPredicted RBP19.6■□□□□ 0.73
CTSD-205ENST00000438213 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
CTSD-205ENST00000438213 TBC1D8O95759 1140 aa19.59■□□□□ 0.73
CTSD-205ENST00000438213 CYP2D6P10635 497 aa19.59■□□□□ 0.73
CTSD-205ENST00000438213 SDSP20132 328 aa19.59■□□□□ 0.73
CTSD-205ENST00000438213 TDO2P48775 406 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms