RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 MUC3BQ9H195 1237 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 RASSF4Q9H2L5 321 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 TMEM260Q9NX78 707 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 SIGLEC1Q9BZZ2 1709 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 KIAA1210Q9ULL0 1709 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 UGGT1Q9NYU2 1555 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
SPEN-202ENST00000438066 J3QW42 95 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 CENPBP07199 599 aaPredicted RBP8.35□□□□□ -1.07
SPEN-202ENST00000438066 ATP11AP98196 1134 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 MLLT1Q03111 559 aaPredicted RBP8.35□□□□□ -1.07
SPEN-202ENST00000438066 TNP2Q05952 138 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 FXNQ16595 210 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 MTERF2Q49AM1 385 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 ARSHQ5FYA8 562 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 RPS26P11Q5JNZ5 115 aaPredicted RBP8.35□□□□□ -1.07
SPEN-202ENST00000438066 IFFO2Q5TF58 517 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 SLC30A3Q99726 388 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 HCN2Q9UL51 889 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 ZNRF3Q9ULT6 936 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 IQGAP1P46940 1657 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 YEATS2Q9ULM3 1422 aa8.35□□□□□ -1.07
SPEN-202ENST00000438066 MAP3K6O95382 1288 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 RAPGEF3O95398 923 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PPP2R3AQ06190 1150 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 LSRQ86X29 649 aaPredicted RBP8.34□□□□□ -1.07
SPEN-202ENST00000438066 OR6P1Q8NGX9 317 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 MARK1Q9P0L2 795 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PFDN2Q9UHV9 154 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 ADGRB3O60242 1522 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PIK3C2BO00750 1634 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 NPATQ14207 1427 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 SENP3-EIF4A1A0A087X0R7 540 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 CILPO75339 1184 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 GJB6O95452 261 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 BPNT1O95861 308 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 HOXD8P13378 290 aaPredicted RBP8.34□□□□□ -1.07
SPEN-202ENST00000438066 BMP6P22004 513 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PRR20EP86478 221 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PRR20CP86479 221 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PRR20DP86480 221 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PRR20BP86481 221 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PRR20AP86496 221 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 TKFCQ3LXA3 575 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 C16orf86Q6ZW13 317 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 PBX4Q9BYU1 374 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
SPEN-202ENST00000438066 KIF7Q2M1P5 1343 aa8.34□□□□□ -1.08
SPEN-202ENST00000438066 MYOM2P54296 1465 aa8.33□□□□□ -1.08
SPEN-202ENST00000438066 DDAH1O94760 285 aa8.33□□□□□ -1.08
SPEN-202ENST00000438066 LBRQ14739 615 aaKnown RBP8.33□□□□□ -1.08
SPEN-202ENST00000438066 PLEKHG6Q3KR16 790 aa8.33□□□□□ -1.08
SPEN-202ENST00000438066 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
SPEN-202ENST00000438066 FEZ1Q99689 392 aa8.33□□□□□ -1.08
SPEN-202ENST00000438066 CBX8Q9HC52 389 aa8.33□□□□□ -1.08
SPEN-202ENST00000438066 DDX56Q9NY93 547 aaKnown RBP8.33□□□□□ -1.08
SPEN-202ENST00000438066 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
SPEN-202ENST00000438066 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 BNIP3LO60238 219 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 CD33P20138 364 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 NRLP54845 237 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 SIK1P57059 783 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 LAMC2Q13753 1193 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 C2orf27AQ580R0 203 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 GRIN3AQ8TCU5 1115 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 STAG1Q8WVM7 1258 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 CLEC4MQ9H2X3 399 aaPredicted RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 IGFLR1Q9H665 355 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 CYP8B1Q9UNU6 501 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 PPME1Q9Y570 386 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 PCDHB14Q9Y5E9 798 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 CFAP65Q6ZU64 1925 aaKnown RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 PPLO60437 1756 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 ARHGEF40Q8TER5 1519 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 SYNMO15061 1565 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 B2RBV5 119 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 CCER2I3L3R5 266 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 IMPDH2P12268 514 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 UBAP2LQ14157 1087 aaKnown RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 RGL3Q3MIN7 710 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 SPATC1Q76KD6 591 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 STK35Q8TDR2 534 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 ZFP42Q96MM3 310 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 POP1Q99575 1024 aaKnown RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 CARD11Q9BXL7 1154 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 IRF2BPLQ9H1B7 796 aa8.32□□□□□ -1.08
SPEN-202ENST00000438066 NUCKS1Q9H1E3 243 aaKnown RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 G3BP2Q9UN86 482 aaKnown RBP8.32□□□□□ -1.08
SPEN-202ENST00000438066 KDM2BQ8NHM5 1336 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 ARHGAP31Q2M1Z3 1444 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 AGLP35573 1532 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 ANP32CO43423 234 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms