RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CLSTN2Q9H4D0 955 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CABP5Q9NP86 173 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 SERPINB6P35237 376 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 PAWRQ96IZ0 340 aaKnown RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 JRKLQ9Y4A0 524 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CUL7Q14999 1698 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 KIF11P52732 1056 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 DDX41Q9UJV9 622 aaKnown RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 IGF1RP08069 1367 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 BAG2O95816 211 aa12.77□□□□□ -0.36
PTCH1-209ENST00000437951 GNA14O95837 355 aa12.77□□□□□ -0.36
PTCH1-209ENST00000437951 KCNA4P22459 653 aa12.77□□□□□ -0.36
PTCH1-209ENST00000437951 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.36
PTCH1-209ENST00000437951 ARHGAP18Q8N392 663 aa12.77□□□□□ -0.36
PTCH1-209ENST00000437951 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-209ENST00000437951 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.36
PTCH1-209ENST00000437951 SDSP20132 328 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-209ENST00000437951 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTCH1-209ENST00000437951 DAAM1Q9Y4D1 1078 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 MUM1L1Q5H9M0 696 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 CFAP61Q8NHU2 1237 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 BRF1Q92994 677 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 MX2P20592 715 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 PODNQ7Z5L7 613 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 CTAGE3PQ8IX95 158 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 SH3GL3Q99963 347 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 AMOTL2Q9Y2J4 779 aa12.77□□□□□ -0.37
PTCH1-209ENST00000437951 NLRP12P59046 1061 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 FANCCQ00597 558 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 CTNND2Q9UQB3 1225 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 LIG3P49916 1009 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-209ENST00000437951 C9orf84Q5VXU9 1444 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 BCRP11274 1271 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 MAN1A1P33908 653 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
PTCH1-209ENST00000437951 PRAM1Q96QH2 718 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 HAUS7Q99871 368 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 RRAGDQ9NQL2 400 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-209ENST00000437951 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 EEF1DP29692 281 aaKnown RBP12.76□□□□□ -0.37
PTCH1-209ENST00000437951 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 CCDC13Q8IYE1 715 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 TSC1Q92574 1164 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 FGFR1OP2Q9NVK5 253 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 SLC12A2P55011 1212 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 IL9RQ01113 521 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-209ENST00000437951 ANGPTL3Q9Y5C1 460 aa12.76□□□□□ -0.37
PTCH1-209ENST00000437951 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 CCDC105Q8IYK2 499 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 SPDL1Q96EA4 605 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 CCDC8Q9H0W5 538 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 RBM8AQ9Y5S9 174 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 VPS41P49754 854 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 RAPGEF1Q13905 1077 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 HEATR3Q7Z4Q2 680 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 MRPL46Q9H2W6 279 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 GFAPP14136 432 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 PPP2R5AQ15172 486 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 TMEM232C9JQI7 657 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 NBPF10Q6P3W6 841 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 PEX26Q7Z412 305 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 IWS1Q96ST2 819 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 GLT8D2Q9H1C3 349 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 NAPAP54920 295 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 FLIIQ13045 1269 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 PAK1Q13153 545 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 RASA3Q14644 834 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 EXOC7Q9UPT5 735 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 A0A1B0GW55 424 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 SART1O43290 800 aaKnown RBP12.75□□□□□ -0.37
PTCH1-209ENST00000437951 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
PTCH1-209ENST00000437951 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms