RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 ZNF165P49910 485 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 PPP2R3AQ06190 1150 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 CCDC40Q4G0X9 1142 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 TRIM65Q6PJ69 517 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 MTHFD1LQ6UB35 978 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 YTHDF3Q7Z739 585 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 IL17REQ8NFR9 667 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 ZFAND2BQ8WV99 257 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 TRIM4Q9C037 500 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 UNC45AQ9H3U1 944 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 RAB21Q9UL25 225 aa9.03□□□□□ -0.96
GAPVD1-209ENST00000436712 SYNRGQ9UMZ2 1314 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 MEFVO15553 781 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 RNF40O75150 1001 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 PHACTR2O75167 634 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 ATP6V1G1O75348 118 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 RNF8O76064 485 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 SASH1O94885 1247 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 CCDC170Q8IYT3 715 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 SYTL4Q96C24 671 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 PHACTR1Q9C0D0 580 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 PAPOLBQ9NRJ5 636 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 USP16Q9Y5T5 823 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 WDR17Q8IZU2 1322 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 GOLGA6L10A6NI86 522 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 FIBPO43427 364 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 PRPF6O94906 941 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 NEK4P51957 841 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 TMED1Q13445 227 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 TSNAXIP1Q2TAA8 658 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 C1orf141Q5JVX7 400 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 TRIM58Q8NG06 486 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 API5Q9BZZ5 524 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 GBP3Q9H0R5 595 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 VCPKMTQ9H867 229 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 SPATA7Q9P0W8 599 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 IMPACTQ9P2X3 320 aa9.02□□□□□ -0.97
GAPVD1-209ENST00000436712 KAT6BQ8WYB5 2073 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 CRB1P82279 1406 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 LIN7AO14910 233 aaPredicted RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 TATP17735 454 aaPredicted RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 AARSP49588 968 aaKnown RBP eCLIP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 IRAK1P51617 712 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 MPP3Q13368 585 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 CASP8Q14790 479 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 RBM43Q6ZSC3 357 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 BZW1Q7L1Q6 419 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 PARP9Q8IXQ6 854 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 ARL10Q8N8L6 244 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 CCDC150Q8NCX0 1101 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 GORASP1Q9BQQ3 440 aa9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 DNAAF2Q9NVR5 837 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-209ENST00000436712 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 PPFIA3O75145 1194 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 GSPT1P15170 499 aaKnown RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 PDE6BP35913 854 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 NME8Q8N427 588 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 BCAS4Q8TDM0 211 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 SMCR8Q8TEV9 937 aaPredicted RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 DTNBP1Q96EV8 351 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 YIPF3Q9GZM5 350 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 ANKIB1Q9P2G1 1089 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 TPCN1Q9ULQ1 816 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 CDHR2Q9BYE9 1310 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 FANCGO15287 622 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 SLMAPQ14BN4 828 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 KIF4BQ2VIQ3 1234 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 FAM228AQ86W67 206 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 FAM114A1Q8IWE2 563 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 DDX54Q8TDD1 881 aaKnown RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 OTUD7AQ8TE49 926 aaPredicted RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 SMARCC1Q92922 1105 aaPredicted RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 CUL5Q93034 780 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 CCDC47Q96A33 483 aaKnown RBP9□□□□□ -0.97
GAPVD1-209ENST00000436712 C8orf37Q96NL8 207 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 SPAG5Q96R06 1193 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 CENPHQ9H3R5 247 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 DCTPP1Q9H773 170 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 VIPAS39Q9H9C1 493 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 SLC40A1Q9NP59 571 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 TRPC6Q9Y210 931 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 TMEM98Q9Y2Y6 226 aa9□□□□□ -0.97
GAPVD1-209ENST00000436712 LRRC10BA6NIK2 292 aa8.99□□□□□ -0.97
GAPVD1-209ENST00000436712 KCNQ3O43525 872 aa8.99□□□□□ -0.97
GAPVD1-209ENST00000436712 E2F6O75461 281 aa8.99□□□□□ -0.97
GAPVD1-209ENST00000436712 CAPN15O75808 1086 aa8.99□□□□□ -0.97
GAPVD1-209ENST00000436712 CYP11B2P19099 503 aa8.99□□□□□ -0.97
GAPVD1-209ENST00000436712 VCAM1P19320 739 aa8.99□□□□□ -0.97
GAPVD1-209ENST00000436712 EIF4BP23588 611 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms