RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ADAMTS19Q8TE59 1207 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 RUFY2Q8WXA3 655 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 TSC1Q92574 1164 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 APPBP2Q92624 585 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 OSBP2Q969R2 916 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 USP26Q9BXU7 913 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 HELLSQ9NRZ9 838 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 RAI14Q9P0K7 980 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 ZNF532Q9HCE3 1301 aa8.46□□□□□ -1.06
LSM3P3-201ENST00000436601 M0R2C6 588 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 REC8O95072 547 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 IARSP41252 1262 aaKnown RBP8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 MECOMQ03112 1051 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 PTH1RQ03431 593 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 KMT5BQ4FZB7 885 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 TTLL5Q6EMB2 1281 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 CCDC129Q6ZRS4 1044 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 ADGRA1Q86SQ6 560 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 LARGE2Q8N3Y3 721 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 NSUN4Q96CB9 384 aaKnown RBP8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 MXD3Q9BW11 206 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 LSG1Q9H089 658 aaKnown RBP8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 NBPF3Q9H094 633 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 PUS7LQ9H0K6 701 aaKnown RBP8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 TAOK3Q9H2K8 898 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 ALG2Q9H553 416 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 USTQ9Y2C2 406 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 MAST3O60307 1309 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 RAD50Q92878 1312 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 LTBP3Q9NS15 1303 aa8.45□□□□□ -1.06
LSM3P3-201ENST00000436601 COL4A5P29400 1685 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 EIF5BO60841 1220 aaKnown RBP8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 IGSF3O75054 1194 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 LDHBP07195 334 aaKnown RBP8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 YBX3P16989 372 aaKnown RBP eCLIP8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 CYP7A1P22680 504 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 RASSF7Q02833 373 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 VAC14Q08AM6 782 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 MFSD14BQ5SR56 506 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 DACT2Q5SW24 774 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 STRIP1Q5VSL9 837 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 SPTY2D1Q68D10 685 aaPredicted RBP8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 NAA16Q6N069 864 aaPredicted RBP8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 ZGPATQ8N5A5 531 aaKnown RBP8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 PNMA1Q8ND90 353 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 TBC1D22AQ8WUA7 517 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 PPP1R12CQ9BZL4 782 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 ZNRF3Q9ULT6 936 aa8.44□□□□□ -1.06
LSM3P3-201ENST00000436601 USP17L3A6NCW0 530 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 USP17L4A6NCW7 530 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 FOXP2O15409 715 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 RBM25P49756 843 aaKnown RBP8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 FKBP1AP62942 108 aaKnown RBP8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 VPS53Q5VIR6 699 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 TMED8Q6PL24 325 aaPredicted RBP8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 KIAA1211Q6ZU35 1233 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 ARHGAP27Q6ZUM4 889 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 USP17L1Q7RTZ2 530 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 NIM1KQ8IY84 436 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 MAP4K1Q92918 833 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 STRBPQ96SI9 672 aaKnown RBP8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 C22orf23Q9BZE7 217 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 UPF2Q9HAU5 1272 aaKnown RBP8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 CCDC171Q6TFL3 1326 aa8.43□□□□□ -1.06
LSM3P3-201ENST00000436601 GPAA1O43292 621 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 EPB41L2O43491 1005 aaKnown RBP8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 RAD17O75943 681 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 MBD4O95243 580 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 VIL1P09327 827 aaKnown RBP8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 Q3C1V9 767 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 LCORLQ8N3X6 602 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 MIGA1Q8NAN2 632 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 FAM163AQ96GL9 167 aaPredicted RBP8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 KIF2CQ99661 725 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 RIOK1Q9BRS2 568 aaKnown RBP8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 ARMT1Q9H993 441 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 SUGT1Q9Y2Z0 365 aa8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 RBM19Q9Y4C8 960 aaKnown RBP8.42□□□□□ -1.06
LSM3P3-201ENST00000436601 AKAP11Q9UKA4 1901 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 F8W031 263 aaPredicted RBP8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 FZD9O00144 591 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 PSMD14O00487 310 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 PRKAB2O43741 272 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 HSPD1P10809 573 aaKnown RBP8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 HSPA4P34932 840 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 GSTO1P78417 241 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 CXCL9Q07325 125 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 NECTIN1Q15223 517 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms