RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	DDX4	Q9NQI0	724 aa	Known RBP	12.48	□□□□□ -0.41
RPP21-223	ENST00000436442	PRKAR2A	P13861	404 aa	Known RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	CACNB2	Q08289	660 aa	Predicted RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	DDX10	Q13206	875 aa	Known RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	PUM3	Q15397	648 aa	Known RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	NCBP3	Q53F19	620 aa	Known RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	MAFA	Q8NHW3	353 aa	Predicted RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	TTYH1	Q9H313	450 aa	Predicted RBP	12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	PNMA3	Q9UL41	463 aa		12.47	□□□□□ -0.41
RPP21-223	ENST00000436442	SIPA1L1	O43166	1804 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	XIRP2	A4UGR9	3374 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	TBC1D12	O60347	775 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	COL9A1	P20849	921 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	RFX5	P48382	616 aa	Predicted RBP	12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	RRP1B	Q14684	758 aa	Known RBP	12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	SH3D19	Q5HYK7	790 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	ZNF697	Q5TEC3	545 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	POTEE	Q6S8J3	1075 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	SRCIN1	Q9C0H9	1055 aa		12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	LRRFIP2	Q9Y608	721 aa	Known RBP	12.46	□□□□□ -0.41
RPP21-223	ENST00000436442	IFIT1	P09914	478 aa	Known RBP	12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	CCND3	P30281	292 aa	Predicted RBP	12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	EXOSC9	Q06265	439 aa	Known RBP	12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	SPP2	Q13103	211 aa		12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	ATG9A	Q7Z3C6	839 aa		12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	FAM163A	Q96GL9	167 aa	Predicted RBP	12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	CHD7	Q9P2D1	2997 aa		12.45	□□□□□ -0.42
RPP21-223	ENST00000436442	PEX10	O60683	326 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	LDHB	P07195	334 aa	Known RBP	12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	CYP2B6	P20813	491 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	MORN1	Q5T089	497 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	ZNF280C	Q8ND82	737 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	MYLIP	Q8WY64	445 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	LPIN2	Q92539	896 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	TXNRD2	Q9NNW7	524 aa		12.44	□□□□□ -0.42
RPP21-223	ENST00000436442	NPM3	O75607	178 aa	Known RBP	12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	IGHA2	P01877	340 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	HMGCS2	P54868	508 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	RHBDL3	P58872	404 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	SHH	Q15465	462 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	CCL14	Q16627	93 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	C9orf50	Q5SZB4	431 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	ZNF384	Q8TF68	577 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	RBPJL	Q9UBG7	517 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	RAPGEFL1	Q9UHV5	662 aa		12.43	□□□□□ -0.42
RPP21-223	ENST00000436442	FAM196B	A6NMK8	535 aa		12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	EYA2	O00167	538 aa		12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	HOXA7	P31268	230 aa	Predicted RBP	12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	TRMT44	Q8IYL2	757 aa	Known RBP	12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	SYMPK	Q92797	1274 aa	Known RBP	12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	P2RX7	Q99572	595 aa	Known RBP	12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	NUDT12	Q9BQG2	462 aa		12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.42	□□□□□ -0.42
RPP21-223	ENST00000436442	TRANK1	O15050	2925 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	SLC5A1	P13866	664 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	CAP2	P40123	477 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	SMAD3	P84022	425 aa	Known RBP	12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.41	□□□□□ -0.42	3e-7	■■□□□ 13.2
RPP21-223	ENST00000436442		Q3C1V9	767 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	CCDC184	Q52MB2	194 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	SLC4A10	Q6U841	1118 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	SOCS4	Q8WXH5	440 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	CDK5RAP2	Q96SN8	1893 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	TBC1D2	Q9BYX2	928 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	PORCN	Q9H237	461 aa		12.41	□□□□□ -0.42
RPP21-223	ENST00000436442	SEMA3E	O15041	775 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	ZKSCAN1	P17029	563 aa	Predicted RBP	12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	PHKA1	P46020	1223 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	JAG1	P78504	1218 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	WDR63	Q8IWG1	891 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	USP38	Q8NB14	1042 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	WDR18	Q9BV38	432 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	SENP6	Q9GZR1	1112 aa	Predicted RBP	12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	USP44	Q9H0E7	712 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	FLRT1	Q9NZU1	646 aa		12.4	□□□□□ -0.42
RPP21-223	ENST00000436442	GPR75-ASB3	A0A0A6YYF3	556 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	USP17L5	A8MUK1	530 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	TNFRSF10A	O00220	468 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	MAPK4	P31152	587 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	ZEB1	P37275	1124 aa	Predicted RBP	12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	HERVK_113	P62684	666 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	GPR142	Q7Z601	462 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	GPRC5A	Q8NFJ5	357 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	DENND2A	Q9ULE3	1009 aa		12.39	□□□□□ -0.43
RPP21-223	ENST00000436442	PDS5A	Q29RF7	1337 aa	Known RBP	12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	PLA2G5	P39877	138 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	RGS2	P41220	211 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	BTD	P43251	543 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	BACE1	P56817	501 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	RTP1	P59025	263 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	ERVK-9	P63128	1117 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	ERVK-24	P63145	666 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	PICALM	Q13492	652 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	SNX17	Q15036	470 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	ATP2B3	Q16720	1220 aa		12.38	□□□□□ -0.43
RPP21-223	ENST00000436442	TJAP1	Q5JTD0	557 aa		12.38	□□□□□ -0.43

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