RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 SH3D19Q5HYK7 790 aa18.71■□□□□ 0.59
NELFE-204ENST00000436289 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
NELFE-204ENST00000436289 VCANP13611 3396 aa18.71■□□□□ 0.59
NELFE-204ENST00000436289 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
NELFE-204ENST00000436289 TTC28Q96AY4 2481 aa18.71■□□□□ 0.58
NELFE-204ENST00000436289 PTPRFP10586 1907 aa18.7■□□□□ 0.58
NELFE-204ENST00000436289 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
NELFE-204ENST00000436289 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
NELFE-204ENST00000436289 GPRC5AQ8NFJ5 357 aa18.7■□□□□ 0.58
NELFE-204ENST00000436289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.7■□□□□ 0.58
NELFE-204ENST00000436289 AS3MTQ9HBK9 375 aa18.7■□□□□ 0.58
NELFE-204ENST00000436289 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
NELFE-204ENST00000436289 COL2A1P02458 1487 aaPredicted RBP18.7■□□□□ 0.58
NELFE-204ENST00000436289 ZKSCAN1P17029 563 aaPredicted RBP18.69■□□□□ 0.58
NELFE-204ENST00000436289 MAPK4P31152 587 aa18.69■□□□□ 0.58
NELFE-204ENST00000436289 LRRC26Q2I0M4 334 aa18.69■□□□□ 0.58
NELFE-204ENST00000436289 LHX8Q68G74 356 aa18.69■□□□□ 0.58
NELFE-204ENST00000436289 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
NELFE-204ENST00000436289 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
NELFE-204ENST00000436289 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
NELFE-204ENST00000436289 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
NELFE-204ENST00000436289 HOXA7P31268 230 aaPredicted RBP18.68■□□□□ 0.58
NELFE-204ENST00000436289 HMGCS2P54868 508 aa18.68■□□□□ 0.58
NELFE-204ENST00000436289 IRX3P78415 501 aaPredicted RBP18.68■□□□□ 0.58
NELFE-204ENST00000436289 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
NELFE-204ENST00000436289 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
NELFE-204ENST00000436289 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
NELFE-204ENST00000436289 CDX2Q99626 313 aaPredicted RBP18.68■□□□□ 0.58
NELFE-204ENST00000436289 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
NELFE-204ENST00000436289 DOCK2Q92608 1830 aa18.67■□□□□ 0.58
NELFE-204ENST00000436289 DOCK1Q14185 1865 aa18.67■□□□□ 0.58
NELFE-204ENST00000436289 CAP2P40123 477 aa18.67■□□□□ 0.58
NELFE-204ENST00000436289 RGS2P41220 211 aa18.67■□□□□ 0.58
NELFE-204ENST00000436289 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
NELFE-204ENST00000436289 MAFAQ8NHW3 353 aaPredicted RBP18.67■□□□□ 0.58
NELFE-204ENST00000436289 FAM161BQ96MY7 647 aa18.67■□□□□ 0.58
NELFE-204ENST00000436289 PDS5AQ29RF7 1337 aaKnown RBP18.67■□□□□ 0.58
NELFE-204ENST00000436289 PHIPQ8WWQ0 1821 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 MSCO60682 206 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 CIAO1O76071 339 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 PICALMQ13492 652 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 SEMA6BQ9H3T3 888 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
NELFE-204ENST00000436289 TMOD4Q9NZQ9 345 aa18.66■□□□□ 0.58
NELFE-204ENST00000436289 MYH13Q9UKX3 1938 aa18.65■□□□□ 0.58
NELFE-204ENST00000436289 GPR75-ASB3A0A0A6YYF3 556 aa18.65■□□□□ 0.58
NELFE-204ENST00000436289 C19orf81C9J6K1 198 aa18.65■□□□□ 0.58
NELFE-204ENST00000436289 BTDP43251 543 aa18.65■□□□□ 0.58
NELFE-204ENST00000436289 RFX5P48382 616 aaPredicted RBP18.65■□□□□ 0.58
NELFE-204ENST00000436289 USP6NLQ92738 828 aa18.65■□□□□ 0.58
NELFE-204ENST00000436289 HERC5Q9UII4 1024 aaKnown RBP18.65■□□□□ 0.58
NELFE-204ENST00000436289 LAMA2P24043 3122 aaKnown RBP18.65■□□□□ 0.58
NELFE-204ENST00000436289 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.57
NELFE-204ENST00000436289 BACE1P56817 501 aa18.64■□□□□ 0.57
NELFE-204ENST00000436289 ATG9AQ7Z3C6 839 aa18.64■□□□□ 0.57
NELFE-204ENST00000436289 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
NELFE-204ENST00000436289 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
NELFE-204ENST00000436289 SENP6Q9GZR1 1112 aaPredicted RBP18.64■□□□□ 0.57
NELFE-204ENST00000436289 USP44Q9H0E7 712 aa18.64■□□□□ 0.57
NELFE-204ENST00000436289 GINM1Q9NU53 330 aa18.64■□□□□ 0.57
NELFE-204ENST00000436289 LDHCP07864 332 aa18.63■□□□□ 0.57
NELFE-204ENST00000436289 SMAD3P84022 425 aaKnown RBP18.63■□□□□ 0.57
NELFE-204ENST00000436289 APBA2Q99767 749 aa18.63■□□□□ 0.57
NELFE-204ENST00000436289 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
NELFE-204ENST00000436289 ABCF2Q9UG63 623 aa18.63■□□□□ 0.57
NELFE-204ENST00000436289 MROH7-TTC4A0A0A0MT08 1334 aa18.63■□□□□ 0.57
NELFE-204ENST00000436289 PTPRCP08575 1304 aa18.63■□□□□ 0.57
NELFE-204ENST00000436289 ASNSP08243 561 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 CCND3P30281 292 aaPredicted RBP18.62■□□□□ 0.57
NELFE-204ENST00000436289 RHBDL3P58872 404 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 HERVK_113P62684 666 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 GSTO1P78417 241 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 MORN1Q5T089 497 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 MFSD14CQ5VZR4 134 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 PLEKHH3Q7Z736 793 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 MYH2Q9UKX2 1941 aa18.62■□□□□ 0.57
NELFE-204ENST00000436289 LOC285556D6RIA3 1793 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 TMEM265A0A087WTH1 108 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 SLURP2P0DP57 97 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
NELFE-204ENST00000436289 PHKA1P46020 1223 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 CCDC102BQ68D86 513 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 GPR142Q7Z601 462 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 LPAR1Q92633 364 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 DHX36Q9H2U1 1008 aaKnown RBP18.61■□□□□ 0.57
NELFE-204ENST00000436289 PI4KBQ9UBF8 816 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 RBPJLQ9UBG7 517 aa18.61■□□□□ 0.57
NELFE-204ENST00000436289 SPTBN5Q9NRC6 3674 aaKnown RBP18.61■□□□□ 0.57
NELFE-204ENST00000436289 DNM1LO00429 736 aa18.6■□□□□ 0.57
NELFE-204ENST00000436289 ERVK-9P63128 1117 aa18.6■□□□□ 0.57
NELFE-204ENST00000436289 ERVK-24P63145 666 aa18.6■□□□□ 0.57
NELFE-204ENST00000436289 CCNA1P78396 465 aa18.6■□□□□ 0.57
NELFE-204ENST00000436289 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
NELFE-204ENST00000436289 CWC22Q9HCG8 908 aaKnown RBP18.6■□□□□ 0.57
NELFE-204ENST00000436289 TXNRD2Q9NNW7 524 aa18.6■□□□□ 0.57
NELFE-204ENST00000436289 PLXNB2O15031 1838 aa18.59■□□□□ 0.57
NELFE-204ENST00000436289 MAP2K5Q13163 448 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms