RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 MYH8P13535 1937 aa25.28■■□□□ 1.64
GTF3A-203ENST00000435781 MANSC4A6NHS7 340 aaPredicted RBP25.28■■□□□ 1.64
GTF3A-203ENST00000435781 TM4SF4P48230 202 aa25.28■■□□□ 1.64
GTF3A-203ENST00000435781 CTCFP49711 727 aaPredicted RBP25.28■■□□□ 1.64
GTF3A-203ENST00000435781 SREBF2Q12772 1141 aa25.28■■□□□ 1.64
GTF3A-203ENST00000435781 HERC5Q9UII4 1024 aaKnown RBP25.28■■□□□ 1.64
GTF3A-203ENST00000435781 RNF113AO15541 343 aaKnown RBP25.27■■□□□ 1.64
GTF3A-203ENST00000435781 ZFYP08048 801 aaPredicted RBP25.27■■□□□ 1.64
GTF3A-203ENST00000435781 HSPA8P11142 646 aaKnown RBP25.27■■□□□ 1.64
GTF3A-203ENST00000435781 SLC4A8Q2Y0W8 1093 aa25.27■■□□□ 1.64
GTF3A-203ENST00000435781 PLEKHM2Q8IWE5 1019 aa25.27■■□□□ 1.64
GTF3A-203ENST00000435781 FSD1Q9BTV5 496 aa25.27■■□□□ 1.64
GTF3A-203ENST00000435781 PUS7LQ9H0K6 701 aaKnown RBP25.27■■□□□ 1.64
GTF3A-203ENST00000435781 RNF186Q9NXI6 227 aa25.27■■□□□ 1.64
GTF3A-203ENST00000435781 CASP8AP2Q9UKL3 1982 aa25.27■■□□□ 1.64
GTF3A-203ENST00000435781 HLA-DOAP06340 250 aa25.26■■□□□ 1.63
GTF3A-203ENST00000435781 LRRFIP1Q32MZ4 808 aaKnown RBP25.26■■□□□ 1.63
GTF3A-203ENST00000435781 METTL16Q86W50 562 aaKnown RBP25.26■■□□□ 1.63
GTF3A-203ENST00000435781 SDR42E1Q8WUS8 393 aa25.26■■□□□ 1.63
GTF3A-203ENST00000435781 APPBP2Q92624 585 aa25.26■■□□□ 1.63
GTF3A-203ENST00000435781 TSKSQ9UJT2 592 aa25.26■■□□□ 1.63
GTF3A-203ENST00000435781 PRKAB2O43741 272 aa25.25■■□□□ 1.63
GTF3A-203ENST00000435781 CTNND1O60716 968 aaKnown RBP25.25■■□□□ 1.63
GTF3A-203ENST00000435781 PPIL2Q13356 520 aa25.25■■□□□ 1.63
GTF3A-203ENST00000435781 FOXP4Q8IVH2 680 aaPredicted RBP25.25■■□□□ 1.63
GTF3A-203ENST00000435781 SCYL3Q8IZE3 742 aa25.25■■□□□ 1.63
GTF3A-203ENST00000435781 OSBP2Q969R2 916 aa25.25■■□□□ 1.63
GTF3A-203ENST00000435781 SAGE1Q9NXZ1 904 aa25.25■■□□□ 1.63
GTF3A-203ENST00000435781 INHBEP58166 350 aa25.24■■□□□ 1.63
GTF3A-203ENST00000435781 PPATQ06203 517 aa25.24■■□□□ 1.63
GTF3A-203ENST00000435781 CRACR2BQ8N4Y2 399 aaPredicted RBP25.24■■□□□ 1.63
GTF3A-203ENST00000435781 EVI5LQ96CN4 794 aa25.24■■□□□ 1.63
GTF3A-203ENST00000435781 MS4A4AQ96JQ5 239 aa25.24■■□□□ 1.63
GTF3A-203ENST00000435781 OSBPL3Q9H4L5 887 aa25.24■■□□□ 1.63
GTF3A-203ENST00000435781 DNAJC18Q9H819 358 aa25.24■■□□□ 1.63
GTF3A-203ENST00000435781 DCP1AQ9NPI6 582 aaPredicted RBP25.24■■□□□ 1.63
GTF3A-203ENST00000435781 IRF6O14896 467 aa25.23■■□□□ 1.63
GTF3A-203ENST00000435781 TRPA1O75762 1119 aa25.23■■□□□ 1.63
GTF3A-203ENST00000435781 LBX1P52954 281 aa25.23■■□□□ 1.63
GTF3A-203ENST00000435781 PICK1Q9NRD5 415 aa25.23■■□□□ 1.63
GTF3A-203ENST00000435781 TESPA1A2RU30 521 aaPredicted RBP25.22■■□□□ 1.63
GTF3A-203ENST00000435781 GTF2A2P52657 109 aa25.22■■□□□ 1.63
GTF3A-203ENST00000435781 RRP1BQ14684 758 aaKnown RBP25.22■■□□□ 1.63
GTF3A-203ENST00000435781 TTC6Q86TZ1 520 aa25.22■■□□□ 1.63
GTF3A-203ENST00000435781 TRIM34Q9BYJ4 488 aa25.22■■□□□ 1.63
GTF3A-203ENST00000435781 EHD4Q9H223 541 aa25.22■■□□□ 1.63
GTF3A-203ENST00000435781 ATP8A2Q9NTI2 1148 aa25.22■■□□□ 1.63
GTF3A-203ENST00000435781 MCM9Q9NXL9 1143 aa25.22■■□□□ 1.63
GTF3A-203ENST00000435781 IGF2BP3O00425 579 aaKnown RBP eCLIP25.21■■□□□ 1.63
GTF3A-203ENST00000435781 POLR3DP05423 398 aaPredicted RBP25.21■■□□□ 1.63
GTF3A-203ENST00000435781 PTPRAP18433 802 aa25.21■■□□□ 1.63
GTF3A-203ENST00000435781 PDE4AP27815 886 aa25.21■■□□□ 1.63
GTF3A-203ENST00000435781 IFNL1Q8IU54 200 aa25.21■■□□□ 1.63
GTF3A-203ENST00000435781 STRBPQ96SI9 672 aaKnown RBP25.21■■□□□ 1.63
GTF3A-203ENST00000435781 SERPINB13Q9UIV8 391 aa25.21■■□□□ 1.63
GTF3A-203ENST00000435781 SLC4A4Q9Y6R1 1079 aa25.21■■□□□ 1.63
GTF3A-203ENST00000435781 CCL15-CCL14A0A0B4J2E2 113 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 M0R2C6 588 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 CAP2P40123 477 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 PLCD1P51178 756 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 SNAPC2Q13487 334 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 CCL15Q16663 113 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 ZMYM1Q5SVZ6 1142 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 BRI3BPQ8WY22 251 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 PTPN18Q99952 460 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 PRDM10Q9NQV6 1147 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.2■■□□□ 1.62
GTF3A-203ENST00000435781 KCNH4Q9UQ05 1017 aa25.2■■□□□ 1.62
GTF3A-203ENST00000435781 GPAA1O43292 621 aa25.19■■□□□ 1.62
GTF3A-203ENST00000435781 SEC62Q99442 399 aaKnown RBP25.19■■□□□ 1.62
GTF3A-203ENST00000435781 TRIM6-TRIM34B2RNG4 842 aa25.18■■□□□ 1.62
GTF3A-203ENST00000435781 CYP2D6P10635 497 aa25.18■■□□□ 1.62
GTF3A-203ENST00000435781 CETPP11597 493 aa25.18■■□□□ 1.62
GTF3A-203ENST00000435781 EVX2Q03828 476 aa25.18■■□□□ 1.62
GTF3A-203ENST00000435781 ZHX2Q9Y6X8 837 aa25.18■■□□□ 1.62
GTF3A-203ENST00000435781 ALDH1A1P00352 501 aa25.17■■□□□ 1.62
GTF3A-203ENST00000435781 CCDC84Q86UT8 332 aaPredicted RBP25.17■■□□□ 1.62
GTF3A-203ENST00000435781 DDRGK1Q96HY6 314 aa25.17■■□□□ 1.62
GTF3A-203ENST00000435781 CENPBP07199 599 aaPredicted RBP25.16■■□□□ 1.62
GTF3A-203ENST00000435781 GABPAQ06546 454 aa25.16■■□□□ 1.62
GTF3A-203ENST00000435781 OTUD7BQ6GQQ9 843 aa25.16■■□□□ 1.62
GTF3A-203ENST00000435781 TATDN1Q6P1N9 297 aa25.16■■□□□ 1.62
GTF3A-203ENST00000435781 RILPL2Q969X0 211 aa25.16■■□□□ 1.62
GTF3A-203ENST00000435781 AFG3L2Q9Y4W6 797 aa25.16■■□□□ 1.62
GTF3A-203ENST00000435781 GSG1L2A8MUP6 293 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 CXCL11O14625 94 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 GDF11O95390 407 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 TBC1D8O95759 1140 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 JAG1P78504 1218 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 SHROOM1Q2M3G4 852 aaPredicted RBP25.15■■□□□ 1.62
GTF3A-203ENST00000435781 TICAM2Q86XR7 235 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 CFHR5Q9BXR6 569 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 LOC285556D6RIA3 1793 aa25.15■■□□□ 1.62
GTF3A-203ENST00000435781 CYP2D7A0A087X1C5 515 aa25.14■■□□□ 1.62
GTF3A-203ENST00000435781 USP17L12C9JPN9 530 aa25.14■■□□□ 1.62
GTF3A-203ENST00000435781 USP17L21D6R901 530 aa25.14■■□□□ 1.62
GTF3A-203ENST00000435781 ASNSP08243 561 aa25.14■■□□□ 1.62
GTF3A-203ENST00000435781 GNAT2P19087 354 aa25.14■■□□□ 1.62
GTF3A-203ENST00000435781 SHMT1P34896 483 aa25.14■■□□□ 1.62
GTF3A-203ENST00000435781 COL13A1Q5TAT6 717 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms