RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 OSBP2Q969R2 916 aa22.15■■□□□ 1.14
HLA-F-220ENST00000434407 EVI5LQ96CN4 794 aa22.15■■□□□ 1.14
HLA-F-220ENST00000434407 ARMT1Q9H993 441 aa22.15■■□□□ 1.14
HLA-F-220ENST00000434407 HERC5Q9UII4 1024 aaKnown RBP22.15■■□□□ 1.14
HLA-F-220ENST00000434407 DOCK1Q14185 1865 aa22.15■■□□□ 1.14
HLA-F-220ENST00000434407 SPDYE5A6NIY4 337 aa22.14■■□□□ 1.13
HLA-F-220ENST00000434407 CENPBP07199 599 aaPredicted RBP22.14■■□□□ 1.13
HLA-F-220ENST00000434407 PDE4AP27815 886 aa22.14■■□□□ 1.13
HLA-F-220ENST00000434407 TM4SF4P48230 202 aa22.14■■□□□ 1.13
HLA-F-220ENST00000434407 ERO1BQ86YB8 467 aa22.14■■□□□ 1.13
HLA-F-220ENST00000434407 FOXP4Q8IVH2 680 aaPredicted RBP22.14■■□□□ 1.13
HLA-F-220ENST00000434407 OPTNQ96CV9 577 aa22.14■■□□□ 1.13
HLA-F-220ENST00000434407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.14■■□□□ 1.13
HLA-F-220ENST00000434407 DCP1AQ9NPI6 582 aaPredicted RBP22.14■■□□□ 1.13
HLA-F-220ENST00000434407 PHIPQ8WWQ0 1821 aa22.13■■□□□ 1.13
HLA-F-220ENST00000434407 CTNND1O60716 968 aaKnown RBP22.13■■□□□ 1.13
HLA-F-220ENST00000434407 AIDAQ96BJ3 306 aa22.13■■□□□ 1.13
HLA-F-220ENST00000434407 STRBPQ96SI9 672 aaKnown RBP22.13■■□□□ 1.13
HLA-F-220ENST00000434407 FSD1Q9BTV5 496 aa22.13■■□□□ 1.13
HLA-F-220ENST00000434407 DNAJC18Q9H819 358 aa22.13■■□□□ 1.13
HLA-F-220ENST00000434407 ATP8A2Q9NTI2 1148 aa22.13■■□□□ 1.13
HLA-F-220ENST00000434407 SAP30BPQ9UHR5 308 aaKnown RBP22.13■■□□□ 1.13
HLA-F-220ENST00000434407 ATAD5Q96QE3 1844 aa22.13■■□□□ 1.13
HLA-F-220ENST00000434407 MKRN3Q13064 507 aaKnown RBP22.12■■□□□ 1.13
HLA-F-220ENST00000434407 ZMYM1Q5SVZ6 1142 aa22.12■■□□□ 1.13
HLA-F-220ENST00000434407 SDR42E1Q8WUS8 393 aa22.12■■□□□ 1.13
HLA-F-220ENST00000434407 EHD4Q9H223 541 aa22.12■■□□□ 1.13
HLA-F-220ENST00000434407 MANSC4A6NHS7 340 aaPredicted RBP22.11■■□□□ 1.13
HLA-F-220ENST00000434407 FAM196BA6NMK8 535 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 FOXN1O15353 648 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 CA12O43570 354 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 PRKAB2O43741 272 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 HLA-DOAP06340 250 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 INHBEP58166 350 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 SCYL3Q8IZE3 742 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 MS4A4AQ96JQ5 239 aa22.11■■□□□ 1.13
HLA-F-220ENST00000434407 TESPA1A2RU30 521 aaPredicted RBP22.1■■□□□ 1.13
HLA-F-220ENST00000434407 PPATQ06203 517 aa22.1■■□□□ 1.13
HLA-F-220ENST00000434407 SREBF2Q12772 1141 aa22.1■■□□□ 1.13
HLA-F-220ENST00000434407 PPIL2Q13356 520 aa22.1■■□□□ 1.13
HLA-F-220ENST00000434407 TTC6Q86TZ1 520 aa22.1■■□□□ 1.13
HLA-F-220ENST00000434407 PTPRFP10586 1907 aa22.1■■□□□ 1.13
HLA-F-220ENST00000434407 PLCD1P51178 756 aa22.09■■□□□ 1.13
HLA-F-220ENST00000434407 RRP1BQ14684 758 aaKnown RBP22.09■■□□□ 1.13
HLA-F-220ENST00000434407 OTUD5Q96G74 571 aa22.09■■□□□ 1.13
HLA-F-220ENST00000434407 BEGAINQ9BUH8 593 aa22.09■■□□□ 1.13
HLA-F-220ENST00000434407 MCM9Q9NXL9 1143 aa22.09■■□□□ 1.13
HLA-F-220ENST00000434407 SAGE1Q9NXZ1 904 aa22.09■■□□□ 1.13
HLA-F-220ENST00000434407 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.09■■□□□ 1.13
HLA-F-220ENST00000434407 M0R2C6 588 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 IRF6O14896 467 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 GPAA1O43292 621 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 PTPRAP18433 802 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 CAP2P40123 477 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 GABPAQ06546 454 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 GIMAP6Q6P9H5 292 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 CENPQQ7L2Z9 268 aaPredicted RBP22.08■■□□□ 1.13
HLA-F-220ENST00000434407 RNF186Q9NXI6 227 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 SERPINB13Q9UIV8 391 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 TAOK2Q9UL54 1235 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 KCNH4Q9UQ05 1017 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 SLC4A4Q9Y6R1 1079 aa22.08■■□□□ 1.13
HLA-F-220ENST00000434407 GSG1L2A8MUP6 293 aa22.07■■□□□ 1.12
HLA-F-220ENST00000434407 CTCFP49711 727 aaPredicted RBP22.07■■□□□ 1.12
HLA-F-220ENST00000434407 GTF2A2P52657 109 aa22.07■■□□□ 1.12
HLA-F-220ENST00000434407 TATDN1Q6P1N9 297 aa22.07■■□□□ 1.12
HLA-F-220ENST00000434407 SEC62Q99442 399 aaKnown RBP22.07■■□□□ 1.12
HLA-F-220ENST00000434407 POLR3DP05423 398 aaPredicted RBP22.06■■□□□ 1.12
HLA-F-220ENST00000434407 HSPA8P11142 646 aaKnown RBP22.06■■□□□ 1.12
HLA-F-220ENST00000434407 GNAT2P19087 354 aa22.06■■□□□ 1.12
HLA-F-220ENST00000434407 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
HLA-F-220ENST00000434407 PICK1Q9NRD5 415 aa22.06■■□□□ 1.12
HLA-F-220ENST00000434407 GINM1Q9NU53 330 aa22.06■■□□□ 1.12
HLA-F-220ENST00000434407 MYH8P13535 1937 aa22.06■■□□□ 1.12
HLA-F-220ENST00000434407 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 NEFLP07196 543 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 EVX2Q03828 476 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 SLC4A8Q2Y0W8 1093 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 IFNL1Q8IU54 200 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 BRI3BPQ8WY22 251 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 PTPN18Q99952 460 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 CFHR5Q9BXR6 569 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 HELLSQ9NRZ9 838 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 AFG3L2Q9Y4W6 797 aa22.05■■□□□ 1.12
HLA-F-220ENST00000434407 IGF2BP3O00425 579 aaKnown RBP eCLIP22.04■■□□□ 1.12
HLA-F-220ENST00000434407 CXCL11O14625 94 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 CYP2D6P10635 497 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 SNAPC2Q13487 334 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 TTC22Q5TAA0 569 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 C12orf60Q5U649 245 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 CTR9Q6PD62 1173 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 RILPL2Q969X0 211 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 TRIM34Q9BYJ4 488 aa22.04■■□□□ 1.12
HLA-F-220ENST00000434407 CASP8AP2Q9UKL3 1982 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 PATL2C9JE40 543 aaKnown RBP22.03■■□□□ 1.12
HLA-F-220ENST00000434407 USP17L12C9JPN9 530 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 USP17L21D6R901 530 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 TRPA1O75762 1119 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 GSPT1P15170 499 aaKnown RBP22.03■■□□□ 1.12
HLA-F-220ENST00000434407 SHMT1P34896 483 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms