RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 PDE4AP27815 886 aa22.85■■□□□ 1.25
RPUSD3-207ENST00000433555 PLEKHM2Q8IWE5 1019 aa22.85■■□□□ 1.25
RPUSD3-207ENST00000433555 AIDAQ96BJ3 306 aa22.85■■□□□ 1.25
RPUSD3-207ENST00000433555 OTUD5Q96G74 571 aa22.85■■□□□ 1.25
RPUSD3-207ENST00000433555 CRNKL1Q9BZJ0 848 aaKnown RBP22.84■■□□□ 1.25
RPUSD3-207ENST00000433555 M0R2C6 588 aa22.83■■□□□ 1.25
RPUSD3-207ENST00000433555 RNF113AO15541 343 aaKnown RBP22.83■■□□□ 1.25
RPUSD3-207ENST00000433555 TBC1D12O60347 775 aa22.83■■□□□ 1.25
RPUSD3-207ENST00000433555 ZSCAN25Q6NSZ9 544 aa22.83■■□□□ 1.25
RPUSD3-207ENST00000433555 OSBP2Q969R2 916 aa22.83■■□□□ 1.25
RPUSD3-207ENST00000433555 FSD1Q9BTV5 496 aa22.83■■□□□ 1.25
RPUSD3-207ENST00000433555 LOC285556D6RIA3 1793 aa22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 SHROOM1Q2M3G4 852 aaPredicted RBP22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 CCDC84Q86UT8 332 aaPredicted RBP22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 SCYL3Q8IZE3 742 aa22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 APPBP2Q92624 585 aa22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 DHX36Q9H2U1 1008 aaKnown RBP22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 RNF186Q9NXI6 227 aa22.82■■□□□ 1.24
RPUSD3-207ENST00000433555 IGF2BP3O00425 579 aaKnown RBP eCLIP22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 CYP2D6P10635 497 aa22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 TM4SF4P48230 202 aa22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 METTL16Q86W50 562 aaKnown RBP22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 ERO1BQ86YB8 467 aa22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 MS4A4AQ96JQ5 239 aa22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 DCP1AQ9NPI6 582 aaPredicted RBP22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 PI4KBQ9UBF8 816 aa22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 CASP8AP2Q9UKL3 1982 aa22.81■■□□□ 1.24
RPUSD3-207ENST00000433555 MANSC4A6NHS7 340 aaPredicted RBP22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 CTCFP49711 727 aaPredicted RBP22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 LBX1P52954 281 aa22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 JAG1P78504 1218 aa22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 SREBF2Q12772 1141 aa22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 PPIL2Q13356 520 aa22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 SEC62Q99442 399 aaKnown RBP22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 BEGAINQ9BUH8 593 aa22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 HERC5Q9UII4 1024 aaKnown RBP22.8■■□□□ 1.24
RPUSD3-207ENST00000433555 SMIM22K7EJ46 135 aa22.79■■□□□ 1.24
RPUSD3-207ENST00000433555 IRF6O14896 467 aa22.79■■□□□ 1.24
RPUSD3-207ENST00000433555 BRI3BPQ8WY22 251 aa22.79■■□□□ 1.24
RPUSD3-207ENST00000433555 PTPN18Q99952 460 aa22.79■■□□□ 1.24
RPUSD3-207ENST00000433555 OSBPL3Q9H4L5 887 aa22.79■■□□□ 1.24
RPUSD3-207ENST00000433555 TESPA1A2RU30 521 aaPredicted RBP22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 TRPA1O75762 1119 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 HLA-DOAP06340 250 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 ZFYP08048 801 aaPredicted RBP22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 PLCD1P51178 756 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 PPATQ06203 517 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 REM2Q8IYK8 340 aaPredicted RBP22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 EVI5LQ96CN4 794 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 STRBPQ96SI9 672 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 MCM9Q9NXL9 1143 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 SAGE1Q9NXZ1 904 aa22.78■■□□□ 1.24
RPUSD3-207ENST00000433555 CYP2D7A0A087X1C5 515 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 GPAA1O43292 621 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 CA12O43570 354 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 CTNND1O60716 968 aaKnown RBP22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 PTPRAP18433 802 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 ZMYM1Q5SVZ6 1142 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 IFNL1Q8IU54 200 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 CRACR2BQ8N4Y2 399 aaPredicted RBP22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 EHD4Q9H223 541 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 SLC4A4Q9Y6R1 1079 aa22.77■■□□□ 1.24
RPUSD3-207ENST00000433555 CCL15-CCL14A0A0B4J2E2 113 aa22.76■■□□□ 1.23
RPUSD3-207ENST00000433555 CCL15Q16663 113 aa22.76■■□□□ 1.23
RPUSD3-207ENST00000433555 EPB41L4AQ9HCS5 686 aaPredicted RBP22.76■■□□□ 1.23
RPUSD3-207ENST00000433555 KCNH4Q9UQ05 1017 aa22.76■■□□□ 1.23
RPUSD3-207ENST00000433555 GDF11O95390 407 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 CAP2P40123 477 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 GABPAQ06546 454 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 MOGSQ13724 837 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 CCDC129Q6ZRS4 1044 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 FOXP4Q8IVH2 680 aaPredicted RBP22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 R3HDMLQ9H3Y0 253 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 PICK1Q9NRD5 415 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 SERPINB13Q9UIV8 391 aa22.75■■□□□ 1.23
RPUSD3-207ENST00000433555 GREB1LQ9C091 1923 aaPredicted RBP22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 GSG1L2A8MUP6 293 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 POLR3DP05423 398 aaPredicted RBP22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 SHMT1P34896 483 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 GTF2A2P52657 109 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 COL13A1Q5TAT6 717 aaPredicted RBP22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 TTC6Q86TZ1 520 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 FAM43AQ8N2R8 423 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 SLC44A5Q8NCS7 719 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 ATP8A2Q9NTI2 1148 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 ZHX2Q9Y6X8 837 aa22.74■■□□□ 1.23
RPUSD3-207ENST00000433555 ZSWIM8A7E2V4 1837 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 A0A0D9SFI3 127 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 TRIM6-TRIM34B2RNG4 842 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 FOXP2O15409 715 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 TBC1D8O95759 1140 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 GSPT1P15170 499 aaKnown RBP22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 SNAPC2Q13487 334 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 DYNLL2Q96FJ2 89 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 FAM227BQ96M60 508 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 TRIM34Q9BYJ4 488 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 AFG3L2Q9Y4W6 797 aa22.73■■□□□ 1.23
RPUSD3-207ENST00000433555 LRRFIP1Q32MZ4 808 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms