RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 FXR1P51114 621 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■□ 20.1
HMGCS1-202ENST00000433297 FILIP1LQ4L180 1135 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 FBXW10Q5XX13 1052 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 MED15Q96RN5 788 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 SLC26A6Q9BXS9 759 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 EHD4Q9H223 541 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 ABCC6O95255 1503 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 A0A087WUV0 522 aaPredicted RBP13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 MMS22LQ6ZRQ5 1243 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 TFR2Q9UP52 801 aa13.11□□□□□ -0.31
HMGCS1-202ENST00000433297 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 GGCXP38435 758 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 STIM1Q13586 685 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 USP49Q70CQ1 688 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 STAMQ92783 540 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 IP6K1Q92551 441 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 VPS16Q9H269 839 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
HMGCS1-202ENST00000433297 EBAG9O00559 213 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 WHAMMP3Q1A5X7 153 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 TEX2Q8IWB9 1127 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 CAGE1Q8TC20 777 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 EXOC5O00471 708 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 MFAP3LO75121 409 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 CCDC91Q7Z6B0 441 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 A0A1B0GTH6 734 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 N4BP3O15049 544 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 BCAS4Q8TDM0 211 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 TTF2Q9UNY4 1162 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 TECPR2O15040 1411 aa13.09□□□□□ -0.31
HMGCS1-202ENST00000433297 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.31
HMGCS1-202ENST00000433297 CMTR1Q8N1G2 835 aaKnown RBP13.08□□□□□ -0.31
HMGCS1-202ENST00000433297 KAT14Q9H8E8 782 aa13.08□□□□□ -0.31
HMGCS1-202ENST00000433297 LRRC37A3O60309 1634 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 H0YHG0 523 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 CDKL5O76039 1030 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 MRPS25P82663 173 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 MORC3Q14149 939 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 KAT2BQ92831 832 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 FAM169AQ9Y6X4 670 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 B4E1Z4 1266 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 PLCD1P51178 756 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 CNGA4Q8IV77 575 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 MMS19Q96T76 1030 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
HMGCS1-202ENST00000433297 GOLGA8AA7E2F4 631 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 GYPCP04921 128 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 CTCFLQ8NI51 663 aaPredicted RBP13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 ANGEL1Q9UNK9 670 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 ZBTB43O43298 467 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 ERVK-24P63145 666 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 TUBB4BP68371 445 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 TUBB2AQ13885 445 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 ANKRD20A12PQ8NF67 263 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 TUBB2BQ9BVA1 445 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 PUS3Q9BZE2 481 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 KRT9P35527 623 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 MAP2K2P36507 400 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 CHP1Q99653 195 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
HMGCS1-202ENST00000433297 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 ANKARQ7Z5J8 1434 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 PPARDQ03181 441 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms