RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 UBAC1Q9BSL1 405 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 SLC26A6Q9BXS9 759 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 IARSP41252 1262 aaKnown RBP9.67□□□□□ -0.86
HDAC9-212ENST00000432645 TERF1P54274 439 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 GRIK5Q16478 980 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 CTR9Q6PD62 1173 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 TNMDQ9H2S6 317 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 RNF41Q9H4P4 317 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-212ENST00000432645 COL24A1Q17RW2 1714 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 UFL1O94874 794 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 DIXDC1Q155Q3 683 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 NTRK3Q16288 839 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 CPLX2Q6PUV4 134 aaKnown RBP9.67□□□□□ -0.86
HDAC9-212ENST00000432645 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
HDAC9-212ENST00000432645 PPP1R9BQ96SB3 815 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 CLIC4Q9Y696 253 aa9.67□□□□□ -0.86
HDAC9-212ENST00000432645 XDHP47989 1333 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 CDKL5O76039 1030 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 CYP2D6P10635 497 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 ESR2Q92731 530 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 RCOR1Q9UKL0 485 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 TNKSO95271 1327 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 GUCY1A2P33402 732 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 GNL2Q13823 731 aaKnown RBP9.66□□□□□ -0.86
HDAC9-212ENST00000432645 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 CCAR1Q8IX12 1150 aaKnown RBP9.66□□□□□ -0.86
HDAC9-212ENST00000432645 DCP1AQ9NPI6 582 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-212ENST00000432645 LEMD3Q9Y2U8 911 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 IRS2Q9Y4H2 1338 aa9.66□□□□□ -0.86
HDAC9-212ENST00000432645 CACNA1SQ13698 1873 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 APBA3O96018 575 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 LDHBP07195 334 aaKnown RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 KIF23Q02241 960 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 ZNF827Q17R98 1081 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 KRT40Q6A162 431 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 GPATCH11Q8N954 259 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 FUCA2Q9BTY2 467 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 BRIP1Q9BX63 1249 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 CRNKL1Q9BZJ0 848 aaKnown RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 GOLPH3LQ9H4A5 285 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 USP25Q9UHP3 1055 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 NMT2O60551 498 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 SSRP1Q08945 709 aaKnown RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 SF3A1Q15459 793 aaKnown RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 RTN1Q16799 776 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 CRY2Q49AN0 593 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 FAM47AQ5JRC9 791 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 ZNF654Q8IZM8 581 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 RBM17Q96I25 401 aaKnown RBP9.65□□□□□ -0.86
HDAC9-212ENST00000432645 MCM9Q9NXL9 1143 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 SH3BP1Q9Y3L3 701 aa9.65□□□□□ -0.86
HDAC9-212ENST00000432645 hCG_1642624A0A1W2PR95 340 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 C6orf229H3BNL8 230 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 CCDC192P0DO97 292 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 MYSM1Q5VVJ2 828 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 OLFM4Q6UX06 510 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 ZNF804AQ7Z570 1209 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 ENAHQ8N8S7 591 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-212ENST00000432645 ANAPC4Q9UJX5 808 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 PCDHA7Q9UN72 937 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
HDAC9-212ENST00000432645 STK38Q15208 465 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 ZSCAN30Q86W11 494 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 FANCBQ8NB91 859 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 TDRD7Q8NHU6 1098 aaKnown RBP9.64□□□□□ -0.87
HDAC9-212ENST00000432645 ERCC4Q92889 916 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-212ENST00000432645 DDX19AQ9NUU7 478 aaKnown RBP9.64□□□□□ -0.87
HDAC9-212ENST00000432645 POLLQ9UGP5 575 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 A0A1B0GVL5 298 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 MAFGO15525 162 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 TRIM29Q14134 588 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 MSL1Q68DK7 614 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 WDR66Q8TBY9 1149 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 ZSCAN10Q96SZ4 725 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-212ENST00000432645 CD209Q9NNX6 404 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 KCNJ14Q9UNX9 436 aa9.64□□□□□ -0.87
HDAC9-212ENST00000432645 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 USP5P45974 858 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 TYRO3Q06418 890 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 IFIT1BQ5T764 474 aaKnown RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 SPTY2D1Q68D10 685 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 IQCA1Q86XH1 822 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 COL23A1Q86Y22 540 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 FSIP1Q8NA03 581 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 LINC00301Q8NCQ3 95 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 SH3RF3Q8TEJ3 882 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 PDLIM2Q96JY6 352 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 CLSTN2Q9H4D0 955 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 RTEL1Q9NZ71 1219 aa9.63□□□□□ -0.87
HDAC9-212ENST00000432645 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 BAZ2AQ9UIF9 1905 aaKnown RBP9.63□□□□□ -0.87
HDAC9-212ENST00000432645 A0A087WWV3 80 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms