RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PRKAB2O43741 272 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 KDM4AO75164 1064 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 CTDSPL2Q05D32 466 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 USP28Q96RU2 1077 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 SYT17Q9BSW7 474 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 RTFDC1Q9BY42 306 aaPredicted RBP14.92□□□□□ -0.02
DDX56-204ENST00000431640 NOL7Q9UMY1 257 aaKnown RBP14.92□□□□□ -0.02
DDX56-204ENST00000431640 NEDD4P46934 1319 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 TIAM2Q8IVF5 1701 aa14.92□□□□□ -0.02
DDX56-204ENST00000431640 CCDC196A0A1B0GTZ2 297 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 NFKBIEO00221 500 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 IARSP41252 1262 aaKnown RBP14.91□□□□□ -0.02
DDX56-204ENST00000431640 PRELPP51888 382 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 FOSBP53539 338 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 PPARAQ07869 468 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 DALRD3Q5D0E6 543 aaKnown RBP14.91□□□□□ -0.02
DDX56-204ENST00000431640 SPTY2D1Q68D10 685 aaPredicted RBP14.91□□□□□ -0.02
DDX56-204ENST00000431640 SASS6Q6UVJ0 657 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 CCDC73Q6ZRK6 1079 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 CCAR1Q8IX12 1150 aaKnown RBP14.91□□□□□ -0.02
DDX56-204ENST00000431640 MIGA1Q8NAN2 632 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 KCNG4Q8TDN1 519 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 POLR3EQ9NVU0 708 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 NID2Q14112 1375 aa14.91□□□□□ -0.02
DDX56-204ENST00000431640 A0A1W2PQ27 194 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 A0A1W2PQ64 194 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 A0A1W2PQD8 194 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 GOLGA8AA7E2F4 631 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 C6orf229H3BNL8 230 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 YEATS4O95619 227 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 CEBPZQ03701 1054 aaKnown RBP14.9□□□□□ -0.02
DDX56-204ENST00000431640 TRIM29Q14134 588 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 WTAPQ15007 396 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 ESR2Q92731 530 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 ALG1Q9BT22 464 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 BCS1LQ9Y276 419 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 STK36Q9NRP7 1315 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 RIMBP2O15034 1052 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 NR1I2O75469 434 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 ME1P48163 572 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 TYRO3Q06418 890 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 SSRP1Q08945 709 aaKnown RBP14.9□□□□□ -0.02
DDX56-204ENST00000431640 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
DDX56-204ENST00000431640 CAMK4Q16566 473 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 FAM200AQ8TCP9 573 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
DDX56-204ENST00000431640 TOMM22Q9NS69 142 aa14.9□□□□□ -0.02
DDX56-204ENST00000431640 MAST2Q6P0Q8 1798 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 PSME4Q14997 1843 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 IFNAR1P17181 557 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 NT5C2P49902 561 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 STK38Q15208 465 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 NTRK3Q16288 839 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 AOC3Q16853 763 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 MYSM1Q5VVJ2 828 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 JAG2Q9Y219 1238 aa14.89□□□□□ -0.03
DDX56-204ENST00000431640 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 MINDY4BA8MYZ0 360 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 KINO60870 393 aaKnown RBP14.88□□□□□ -0.03
DDX56-204ENST00000431640 FMNL1O95466 1100 aaPredicted RBP14.88□□□□□ -0.03
DDX56-204ENST00000431640 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
DDX56-204ENST00000431640 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.03
DDX56-204ENST00000431640 CDC27P30260 824 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
DDX56-204ENST00000431640 RASSF7Q02833 373 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 FAM160A1Q05DH4 1040 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 RRP12Q5JTH9 1297 aaKnown RBP14.88□□□□□ -0.03
DDX56-204ENST00000431640 MICU3Q86XE3 530 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 TRIM22Q8IYM9 498 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 LINC00301Q8NCQ3 95 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 NSUN4Q96CB9 384 aaKnown RBP14.88□□□□□ -0.03
DDX56-204ENST00000431640 UBAC1Q9BSL1 405 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 CD209Q9NNX6 404 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
DDX56-204ENST00000431640 ADCY5O95622 1261 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
DDX56-204ENST00000431640 FGRP09769 529 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 GNL2Q13823 731 aaKnown RBP14.87□□□□□ -0.03
DDX56-204ENST00000431640 DOK7Q18PE1 504 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 ADGRA1Q86SQ6 560 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 RAB11FIP4Q86YS3 637 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 TDRD7Q8NHU6 1098 aaKnown RBP14.87□□□□□ -0.03
DDX56-204ENST00000431640 PSMD1Q99460 953 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 CRNKL1Q9BZJ0 848 aaKnown RBP14.87□□□□□ -0.03
DDX56-204ENST00000431640 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
DDX56-204ENST00000431640 ATP8A2Q9NTI2 1148 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 FAM217BQ9NTX9 383 aaPredicted RBP14.87□□□□□ -0.03
DDX56-204ENST00000431640 PCDHA7Q9UN72 937 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 MRVI1Q9Y6F6 885 aa14.87□□□□□ -0.03
DDX56-204ENST00000431640 SPTLC2O15270 562 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 POLR3DP05423 398 aaPredicted RBP14.86□□□□□ -0.03
DDX56-204ENST00000431640 TPM3P06753 285 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 IL1R1P14778 569 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 GRIK5Q16478 980 aa14.86□□□□□ -0.03
DDX56-204ENST00000431640 RTN1Q16799 776 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms