RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 RASSF7Q02833 373 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 FZD1Q9UP38 647 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 V9GY48 417 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-205ENST00000431183 ME1P48163 572 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-205ENST00000431183 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-205ENST00000431183 A0A087WWV3 80 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 GNAT2P19087 354 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 RTN1Q16799 776 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-205ENST00000431183 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
SMPD4-205ENST00000431183 MRE11P49959 708 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 SPECC1Q5M775 1068 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 APOA5Q6Q788 366 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 KRT23Q9C075 422 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-205ENST00000431183 MTMR6Q9Y217 621 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-205ENST00000431183 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 GSTO1P78417 241 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 CUL4AQ13619 759 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 CKAP2LQ8IYA6 745 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 NSUN7Q8NE18 718 aaKnown RBP13.14□□□□□ -0.31
SMPD4-205ENST00000431183 TEKT1Q969V4 418 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 SPATA32Q96LK8 384 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 VPS54Q9P1Q0 977 aa13.14□□□□□ -0.31
SMPD4-205ENST00000431183 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 BRD1O95696 1058 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 PDCP20941 246 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 SNAP25P60880 206 aa13.13□□□□□ -0.31
SMPD4-205ENST00000431183 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
SMPD4-205ENST00000431183 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
SMPD4-205ENST00000431183 CTDNEP1O95476 244 aa13.12□□□□□ -0.31
SMPD4-205ENST00000431183 CRKP46108 304 aa13.12□□□□□ -0.31
SMPD4-205ENST00000431183 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 TRIM22Q8IYM9 498 aa13.12□□□□□ -0.31
SMPD4-205ENST00000431183 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 GPKOWQ92917 476 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 COA1Q9GZY4 146 aa13.12□□□□□ -0.31
SMPD4-205ENST00000431183 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 NIM1KQ8IY84 436 aa13.12□□□□□ -0.31
SMPD4-205ENST00000431183 ZNF512BQ96KM6 892 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 RPAP1Q9BWH6 1393 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 ENAHQ8N8S7 591 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 ZSCAN10Q96SZ4 725 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
SMPD4-205ENST00000431183 PSMD14O00487 310 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-205ENST00000431183 KRT85P78386 507 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 STK38Q15208 465 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 PFKFB2O60825 505 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 SLC16A2P36021 539 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 CFAP100Q494V2 611 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 PRMT6Q96LA8 375 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-205ENST00000431183 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 ATP6V1DQ9Y5K8 247 aa13.11□□□□□ -0.31
SMPD4-205ENST00000431183 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
SMPD4-205ENST00000431183 PDILTQ8N807 584 aa13.1□□□□□ -0.31
SMPD4-205ENST00000431183 THSD7AQ9UPZ6 1657 aa13.1□□□□□ -0.31
SMPD4-205ENST00000431183 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-205ENST00000431183 NR5A1Q13285 461 aa13.1□□□□□ -0.31
SMPD4-205ENST00000431183 TRMT1LQ7Z2T5 733 aaKnown RBP13.1□□□□□ -0.31
SMPD4-205ENST00000431183 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
SMPD4-205ENST00000431183 SEMA3EO15041 775 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 DLGAP5Q15398 846 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 TBC1D22AQ8WUA7 517 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms