RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 PICK1Q9NRD5 415 aa20.95■□□□□ 0.94
CTDSP1-203ENST00000431127 RNF186Q9NXI6 227 aa20.95■□□□□ 0.94
CTDSP1-203ENST00000431127 OTOFQ9HC10 1997 aa20.95■□□□□ 0.94
CTDSP1-203ENST00000431127 RNF113AO15541 343 aaKnown RBP20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 MBD4O95243 580 aa20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 GTF2A2P52657 109 aa20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 TTC6Q86TZ1 520 aa20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 SCYL3Q8IZE3 742 aa20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 LCORLQ8N3X6 602 aa20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 SAP30BPQ9UHR5 308 aaKnown RBP20.94■□□□□ 0.94
CTDSP1-203ENST00000431127 TRPA1O75762 1119 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 ALDH1A1P00352 501 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 PPIL2Q13356 520 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 OTUD7BQ6GQQ9 843 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 METTL16Q86W50 562 aaKnown RBP20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 CRACR2BQ8N4Y2 399 aaPredicted RBP20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 APPBP2Q92624 585 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 EVI5LQ96CN4 794 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 FSD1Q9BTV5 496 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 ARMT1Q9H993 441 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 CASP8AP2Q9UKL3 1982 aa20.93■□□□□ 0.94
CTDSP1-203ENST00000431127 TESPA1A2RU30 521 aaPredicted RBP20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 CCDC85CA6NKD9 419 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 SNAPC2Q13487 334 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 SLFNL1Q499Z3 407 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 MCOLN1Q9GZU1 580 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 ATP8A2Q9NTI2 1148 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 FOCADQ5VW36 1801 aa20.92■□□□□ 0.94
CTDSP1-203ENST00000431127 TICAM2Q86XR7 235 aa20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 IFNL1Q8IU54 200 aa20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 MS4A4AQ96JQ5 239 aa20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 PUS7LQ9H0K6 701 aaKnown RBP20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 EHD4Q9H223 541 aa20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 OSBPL3Q9H4L5 887 aa20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 DCP1AQ9NPI6 582 aaPredicted RBP20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
CTDSP1-203ENST00000431127 FAM196BA6NMK8 535 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 IRF6O14896 467 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 CHGBP05060 677 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 POLR3DP05423 398 aaPredicted RBP20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 SLURP2P0DP57 97 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 CETPP11597 493 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 PTPRAP18433 802 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 PLEKHM2Q8IWE5 1019 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 SDR42E1Q8WUS8 393 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 SERPINB13Q9UIV8 391 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 CDK5RAP2Q96SN8 1893 aa20.9■□□□□ 0.94
CTDSP1-203ENST00000431127 MYH7P12883 1935 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 CCL15-CCL14A0A0B4J2E2 113 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 CAP2P40123 477 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 DGKZQ13574 1117 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 CCL15Q16663 113 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 OSBP2Q969R2 916 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 STRBPQ96SI9 672 aaKnown RBP20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 GINM1Q9NU53 330 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 TAOK2Q9UL54 1235 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 KCNH4Q9UQ05 1017 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 SLC4A4Q9Y6R1 1079 aa20.89■□□□□ 0.93
CTDSP1-203ENST00000431127 CXCL11O14625 94 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 GNAT2P19087 354 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 RGS19P49795 217 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 CFHR5Q9BXR6 569 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 TBC1D2Q9BYX2 928 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 ZHX2Q9Y6X8 837 aa20.88■□□□□ 0.93
CTDSP1-203ENST00000431127 IGF2BP3O00425 579 aaKnown RBP eCLIP20.87■□□□□ 0.93
CTDSP1-203ENST00000431127 PRKAB2O43741 272 aa20.87■□□□□ 0.93
CTDSP1-203ENST00000431127 SLC4A8Q2Y0W8 1093 aa20.87■□□□□ 0.93
CTDSP1-203ENST00000431127 BRI3BPQ8WY22 251 aa20.87■□□□□ 0.93
CTDSP1-203ENST00000431127 DNAJC18Q9H819 358 aa20.87■□□□□ 0.93
CTDSP1-203ENST00000431127 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 ASNSP08243 561 aa20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 PLCD1P51178 756 aa20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 ZMYM1Q5SVZ6 1142 aa20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 GIMAP6Q6P9H5 292 aa20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 PTPN18Q99952 460 aa20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 LAMB1P07942 1786 aa20.86■□□□□ 0.93
CTDSP1-203ENST00000431127 MYH1P12882 1939 aa20.85■□□□□ 0.93
CTDSP1-203ENST00000431127 TRIM6-TRIM34B2RNG4 842 aa20.85■□□□□ 0.93
CTDSP1-203ENST00000431127 GPAA1O43292 621 aa20.85■□□□□ 0.93
CTDSP1-203ENST00000431127 TATDN1Q6P1N9 297 aa20.85■□□□□ 0.93
CTDSP1-203ENST00000431127 ZCCHC17Q9NP64 241 aaKnown RBP20.85■□□□□ 0.93
CTDSP1-203ENST00000431127 AFG3L2Q9Y4W6 797 aa20.85■□□□□ 0.93
CTDSP1-203ENST00000431127 USP17L5A8MUK1 530 aa20.84■□□□□ 0.93
CTDSP1-203ENST00000431127 TBC1D8O95759 1140 aa20.84■□□□□ 0.93
CTDSP1-203ENST00000431127 NEFLP07196 543 aa20.84■□□□□ 0.93
CTDSP1-203ENST00000431127 RRP1BQ14684 758 aaKnown RBP20.84■□□□□ 0.93
CTDSP1-203ENST00000431127 NOM1Q5C9Z4 860 aaKnown RBP20.84■□□□□ 0.93
CTDSP1-203ENST00000431127 AS3MTQ9HBK9 375 aa20.84■□□□□ 0.93
CTDSP1-203ENST00000431127 USP17L12C9JPN9 530 aa20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 USP17L21D6R901 530 aa20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 M0R2C6 588 aa20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 GABPAQ06546 454 aa20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 FASTKD5Q7L8L6 764 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 RILPL2Q969X0 211 aa20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 ARPP21Q9UBL0 812 aaPredicted RBP20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 SWAP70Q9UH65 585 aa20.83■□□□□ 0.93
CTDSP1-203ENST00000431127 DOCK1Q14185 1865 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms