RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SFMBT1Q9UHJ3 866 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 CTNND2Q9UQB3 1225 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 MAD1L1Q9Y6D9 718 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 GOLGA8KD6RF30 607 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 CALUO43852 315 aaPredicted RBP18.2■□□□□ 0.5
RIF1-204ENST00000430328 NPR1P16066 1061 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
RIF1-204ENST00000430328 CNNM4Q6P4Q7 775 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 KRT82Q9NSB4 513 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 MKL2Q9ULH7 1088 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 F13A1P00488 732 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 KLHL7Q8IXQ5 586 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 TXLNGQ9NUQ3 528 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 C16orf87Q6PH81 154 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 PIP4K2CQ8TBX8 421 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 PTPRCP08575 1304 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 FAM8A1Q9UBU6 413 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 SV2BQ7L1I2 683 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 POMGNT1Q8WZA1 660 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 CHMP6Q96FZ7 201 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 MED4Q9NPJ6 270 aa18.2■□□□□ 0.5
RIF1-204ENST00000430328 NOP14P78316 857 aaKnown RBP18.2■□□□□ 0.5
RIF1-204ENST00000430328 NONOQ15233 471 aaKnown RBP eCLIP18.2■□□□□ 0.5
RIF1-204ENST00000430328 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 TBC1D32Q96NH3 1257 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 WBP4O75554 376 aaKnown RBP18.19■□□□□ 0.5
RIF1-204ENST00000430328 PDXDC1Q6P996 788 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 PEX26Q7Z412 305 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 TMCO5AQ8N6Q1 288 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 MYRIPQ8NFW9 859 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 PTCD1O75127 700 aaKnown RBP18.19■□□□□ 0.5
RIF1-204ENST00000430328 DEUP1Q05D60 604 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 HDAC11Q96DB2 347 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 ELP1O95163 1332 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
RIF1-204ENST00000430328 RPS6KA1Q15418 735 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 SPDYE2Q495Y8 402 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 BRF1Q92994 677 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 CAPS2Q9BXY5 557 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 ZBTB24O43167 697 aaPredicted RBP18.19■□□□□ 0.5
RIF1-204ENST00000430328 LIG3P49916 1009 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 GNGT1P63211 74 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
RIF1-204ENST00000430328 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
RIF1-204ENST00000430328 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 RAD50Q92878 1312 aa18.19■□□□□ 0.5
RIF1-204ENST00000430328 PPP2R5EQ16537 467 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 Q6ZUG5 572 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 IMPACTQ9P2X3 320 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 USTQ9Y2C2 406 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 TRPA1O75762 1119 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 SUN1O94901 812 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 MAP7D3Q8IWC1 876 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.54e-7■■□□□ 12
RIF1-204ENST00000430328 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 FLOT1O75955 427 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 SND1Q7KZF4 910 aaKnown RBP eCLIP18.18■□□□□ 0.5
RIF1-204ENST00000430328 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 BCRP11274 1271 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 TYW1Q9NV66 732 aaKnown RBP18.18■□□□□ 0.5
RIF1-204ENST00000430328 ZKSCAN8Q15776 578 aaPredicted RBP18.18■□□□□ 0.5
RIF1-204ENST00000430328 RIC8AQ9NPQ8 531 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 SCYL3Q8IZE3 742 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 KIFC3Q9BVG8 833 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 POLE3Q9NRF9 147 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 CUX1P39880 1505 aa18.18■□□□□ 0.5
RIF1-204ENST00000430328 ARHGAP6O43182 974 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 BSPRYQ5W0U4 402 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 CDAN1Q8IWY9 1227 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 BACH1O14867 736 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 RFX1P22670 979 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 POLD1P28340 1107 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
RIF1-204ENST00000430328 LDHAL6AQ6ZMR3 332 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 LRRC8CQ8TDW0 803 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 FLOT2Q14254 428 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 SNX1Q13596 522 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 GOLGA5Q8TBA6 731 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 BCAS4Q8TDM0 211 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 FGD4Q96M96 766 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 TMTC3Q6ZXV5 915 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 VPS16Q9H269 839 aa18.17■□□□□ 0.5
RIF1-204ENST00000430328 GOLGA8CPA6NN73 597 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 OCA2Q04671 838 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 SKIP12755 728 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 ATL3Q6DD88 541 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 HELLSQ9NRZ9 838 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 IPO11Q9UI26 975 aaKnown RBP18.16■□□□□ 0.5
RIF1-204ENST00000430328 ASPHQ12797 758 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms