RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
RPE-206ENST00000429921 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 BTBD18B2RXH4 712 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 ADCY5O95622 1261 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 PTMAP06454 111 aaKnown RBP11.77□□□□□ -0.53
RPE-206ENST00000429921 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
RPE-206ENST00000429921 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
RPE-206ENST00000429921 MYSM1Q5VVJ2 828 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 COL23A1Q86Y22 540 aaPredicted RBP11.77□□□□□ -0.53
RPE-206ENST00000429921 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 SPC24Q8NBT2 197 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 IRS2Q9Y4H2 1338 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
RPE-206ENST00000429921 USP5P45974 858 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 NDUFA8P51970 172 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 NR5A1Q13285 461 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 RASGRP2Q7LDG7 609 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 CLSTN2Q9H4D0 955 aa11.77□□□□□ -0.53
RPE-206ENST00000429921 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 WDHD1O75717 1129 aaPredicted RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 VEGFAP15692 232 aaPredicted RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 SNW1Q13573 536 aaKnown RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 SGMS1Q86VZ5 419 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 ESR2Q92731 530 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 LIFRP42702 1097 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 SART3Q15020 963 aaKnown RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 NOM1Q5C9Z4 860 aaKnown RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 LINC00301Q8NCQ3 95 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 CRNKL1Q9BZJ0 848 aaKnown RBP11.76□□□□□ -0.53
RPE-206ENST00000429921 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
RPE-206ENST00000429921 XDHP47989 1333 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 WDR19Q8NEZ3 1342 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 BIN1O00499 593 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 SEC23AQ15436 765 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 IFIT1BQ5T764 474 aaKnown RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 CPLX2Q6PUV4 134 aaKnown RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 USP17L3A6NCW0 530 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 USP17L4A6NCW7 530 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 ADAMTS3O15072 1205 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 SPTLC2O15270 562 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 PLCD1P51178 756 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 TRIM29Q14134 588 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 USP17L1Q7RTZ2 530 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 C17orf53Q8N3J3 647 aaPredicted RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 TDRD7Q8NHU6 1098 aaKnown RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 RNF41Q9H4P4 317 aaPredicted RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 GGA1Q9UJY5 639 aa11.75□□□□□ -0.53
RPE-206ENST00000429921 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
RPE-206ENST00000429921 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
RPE-206ENST00000429921 GTF2IP78347 998 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 ANO1Q5XXA6 986 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 C11orf57Q6ZUT1 292 aaPredicted RBP11.74□□□□□ -0.53
RPE-206ENST00000429921 ZNF804AQ7Z570 1209 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
RPE-206ENST00000429921 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 BRIP1Q9BX63 1249 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 CBX8Q9HC52 389 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 KCNQ5Q9NR82 932 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 RTEL1Q9NZ71 1219 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 UBR3Q6ZT12 1888 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 TSPY2A6NKD2 308 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 CDKL5O76039 1030 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 PDIA4P13667 645 aaKnown RBP11.74□□□□□ -0.53
RPE-206ENST00000429921 GRIN1Q05586 938 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
RPE-206ENST00000429921 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
RPE-206ENST00000429921 TFAP4Q01664 338 aa11.73□□□□□ -0.53
RPE-206ENST00000429921 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
RPE-206ENST00000429921 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPE-206ENST00000429921 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
RPE-206ENST00000429921 DDX19AQ9NUU7 478 aaKnown RBP11.73□□□□□ -0.53
RPE-206ENST00000429921 LEMD3Q9Y2U8 911 aa11.73□□□□□ -0.53
RPE-206ENST00000429921 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
RPE-206ENST00000429921 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
RPE-206ENST00000429921 SEMA3EO15041 775 aa11.73□□□□□ -0.53
RPE-206ENST00000429921 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
RPE-206ENST00000429921 MMP10P09238 476 aa11.73□□□□□ -0.53
RPE-206ENST00000429921 BTDP43251 543 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms